Gene Hore_08000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_08000 
Symbol 
ID7314787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp859274 
End bp860452 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content37% 
IMG OID643611231 
ProductCystathionine gamma-synthase 
Protein accessionYP_002508552 
Protein GI220931644 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.272555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGACT ATAAATTTAA CACACTATCA ATTCATGGTG GAGATGAAGG GAAAAATCCA 
GAAAATGCTT TGAATTATCC GCTCTTTTTA ACATCAACCT TTACTTTTAA TGACCTTGAA
CATGCTGAAA AGACCTTTTC ATTTGAATGT AAAGATTATG TTTATACAAG AGGGAATAAC
CCTACAACCA GGTTATTAGA GAAAAGGCTG GCCTGCCTTG AAGGTGGGGC AGATTGTGTT
GTTTTTTCTT CTGGTATGGC AGCTATATCA TCAGCACTTC TGTCATTATT AAAGCCGGGT
GATGAATTGA TTGCCCATCA GGTTTTGTAT GGCTCGTCAT ATAAGGTAAT AAAAGAAGTG
TTACCCCGGT ACGGTATCAA AACAAGTTTT ATTGATTTAA CTCAAATTGA CAAATTAAAA
ACAGGTATAA CTGATAAGAC TACATTAATT TATTTTGAAA CTCCGGTCAA CCCCAATCTT
GAAATAATAG ATATTAAAGA AGTTAGCCAG CTATGCTCTT CACATAATAT AAAAGTGGTG
GTTGATAATA CTTTTGCTAC CCCATTTTAC CAGAATCCAT TAAAATTGGG AGCAGATGTT
GTAATCCACA GTGCTACTAA ATACCTGAAT GGCCATGGTG ATGTTCTGGC CGGGGCTGTT
ATTGCCAGGG ATCAGGAATA TATACATGAA TTAAAATTTA ATTATTTAAC TGAACTGGGT
GGTGTTTTAA GTCCCTTTAA TTCCTGGTTA GTATTAAGAG GTCTTAAAAC ATTGGGTCTC
AGAATGAGAG AACATGAAAA AAATGCCAGC AAGATTGCTA AGTACCTTAA AAATCATCCG
GGGATAAACC GGGTATACTA CCCCGGTTTA CAGGACTTTA AGGGTTATGA AATAGCCAAA
AAACAAATGT CCGGTTTTGG GGCAATTATA AGTTTTGAAA TTATGGGTGG GTATCAGGAT
ATAAAAAGGG CAGTTGAATC CCTGAATTTA ATTAAACTGG CCGTTAGCCT CGGAGATGCT
GAAACCCTTA TTGAATATCC CTTTGGCATG ACTCACCGGG ATTATTCCGG TCAAGAACTG
GCCAGAATGG GTCTCAATAA AAATATGGTA AGATTGTCGG TGGGACTTGA AAATTACGAA
GATATAATAG CTGACCTGGA TCAGGCCTTA TCTAAATAA
 
Protein sequence
MDDYKFNTLS IHGGDEGKNP ENALNYPLFL TSTFTFNDLE HAEKTFSFEC KDYVYTRGNN 
PTTRLLEKRL ACLEGGADCV VFSSGMAAIS SALLSLLKPG DELIAHQVLY GSSYKVIKEV
LPRYGIKTSF IDLTQIDKLK TGITDKTTLI YFETPVNPNL EIIDIKEVSQ LCSSHNIKVV
VDNTFATPFY QNPLKLGADV VIHSATKYLN GHGDVLAGAV IARDQEYIHE LKFNYLTELG
GVLSPFNSWL VLRGLKTLGL RMREHEKNAS KIAKYLKNHP GINRVYYPGL QDFKGYEIAK
KQMSGFGAII SFEIMGGYQD IKRAVESLNL IKLAVSLGDA ETLIEYPFGM THRDYSGQEL
ARMGLNKNMV RLSVGLENYE DIIADLDQAL SK