| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_07960 |
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| Symbol | |
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| ID | 7314783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 856986 |
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| End bp | 857672 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643611227 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_002508548 |
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| Protein GI | 220931640 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR02873] probable sporulation protein, polysaccharide deacetylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGATAAAAA AATATGTTGT GGTTATTGCC TTATTTATTG GAATTGTAGC CGGTATGGCC
CGGCATGAAT TAACCATGCC AGTTGTTAGC AGGCCAGATA GTCCCTTTTA CCATGGTGTC
AGGGGAAGAA ATCAGGTAGC TATTACCGTT AATGTGGACT GGGGGGAAAA ATACCTTCCG
GGTATGTTGA GGATATTACA TGAGAACCAG GTAAAAGTAA CTTTTTTTGT GACAGGAAAA
TGGGCCCGAA AATGTCCTGA TCTCCTGCAG GAAATGGCTG CAATGGGACA TGAAATTGGG
AATCATGGAT ATAACCATGC CCACCCGAAG CAGCTCAGCA ATGAGGCTTT GGCAAAGTTA
ATTAAGGATA ATGAAGAATT AATATACAAG GTAACCGGTC AAAGAACAAA GCTTTTTGCC
CCACCATATG GTGAAGTTGA TTCCAGGATA ACAAAGGTTG CCAGCAAGCT GGGTTATGAT
ACCATAATGT GGTCAGCTGA TACAGTTGAC TGGCAAAGGC CTTCACCGGA TATCATTGTG
CAAAGAGTAA TGGCGAAAAT TGACGATGGT GGTATAATTC TGATGCATCC AACTGAACCA
ACTCTTTATG CCCTTGAAGA TATAATTAAT AATCTGAGAC AGAGAGGATA TGAGATAGTA
ACCGTATCTG AATTAATATC AAAGTAA
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| Protein sequence | MIKKYVVVIA LFIGIVAGMA RHELTMPVVS RPDSPFYHGV RGRNQVAITV NVDWGEKYLP
GMLRILHENQ VKVTFFVTGK WARKCPDLLQ EMAAMGHEIG NHGYNHAHPK QLSNEALAKL
IKDNEELIYK VTGQRTKLFA PPYGEVDSRI TKVASKLGYD TIMWSADTVD WQRPSPDIIV
QRVMAKIDDG GIILMHPTEP TLYALEDIIN NLRQRGYEIV TVSELISK
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