Gene Hore_07930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_07930 
Symbol 
ID7314780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp853754 
End bp854686 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content38% 
IMG OID643611224 
Productcell wall hydrolase SleB 
Protein accessionYP_002508545 
Protein GI220931637 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTA ATAATAAATA TAAGAAATAT TGTCTGATTT CAATACTGAC ATTAGTTTTG 
TTAATATCGT TAACTTTAAT TTCCACAGCC GGTCCTAAAT TCACCCTGAT TTATGTTGTT
CAGGAAGGAG ATACCCTGAT TGATATTGCC AGAAAATATG GAGTTTCTGT TAATGATATT
TTAGAGATTA ATGGCATTAC TGAAAATAGC TGGATAAAAT TAGGTCAGGA ACTTATAATT
CCACAACCTG AAAAGAATAA TCTTCCCGAT TGGGATTATA AGCTTTTAGG TAAACCAGAC
AAACTGGACC ATTTTAAACT AGATGTTGGT AGTAATTATT CAGTCAGGGT AAATCCAATG
CAGTCACTGC CTGAAGTTAA AATACCAGCG GATAAGATTA TAACATATCA TGTCGGGCTT
GGGGATACAT TATTTGACCT GGCCCGGAGT TTTAATACTT CTATAGGGGT TATTATGGCC
TTAAACAATA TGGAGGATAG TATTATCAGG GTCGGTGATA AAATAAAATT ACCGATCAAT
AATTTGACCC CACGCCAGGT TCTGGAGAGG ACAATCAATC GAAAAGAACT GGAATTACTG
GCAAGGGCTA TACATGCTGA AGCCCGTGGC GAGCCATTTA TTGGACAGGT TGCTGTTGGT
GCTGTAATTA TAAACAGGGT ATTAAGTCCC CATTTCCCGG ATACATTTTA CGGGGTAATT
TATCAGCCCG GTCAATTTAC AGCTGTAGTA GATGGTCAGA TTAATTTAAC CCCCAACCGC
ACTGCCTTCA GGGCGGCCAG GGAGGCCTTG AAGGGTAATG ACCCGACTAT GGGAGCCTTA
TATTATTATA ATCCAAAGAC TGCTGAAAAC AAATGGTGGT TTGCTACAAG GAGATTGCTG
GTAACAATTG GAGACCATGT TTTCGCAAAG TAA
 
Protein sequence
MSINNKYKKY CLISILTLVL LISLTLISTA GPKFTLIYVV QEGDTLIDIA RKYGVSVNDI 
LEINGITENS WIKLGQELII PQPEKNNLPD WDYKLLGKPD KLDHFKLDVG SNYSVRVNPM
QSLPEVKIPA DKIITYHVGL GDTLFDLARS FNTSIGVIMA LNNMEDSIIR VGDKIKLPIN
NLTPRQVLER TINRKELELL ARAIHAEARG EPFIGQVAVG AVIINRVLSP HFPDTFYGVI
YQPGQFTAVV DGQINLTPNR TAFRAAREAL KGNDPTMGAL YYYNPKTAEN KWWFATRRLL
VTIGDHVFAK