| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_07800 |
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| Symbol | |
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| ID | 7314767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 835713 |
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| End bp | 839906 |
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| Gene Length | 4194 bp |
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| Protein Length | 1397 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643611211 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_002508532 |
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| Protein GI | 220931624 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01405] DNA polymerase III, alpha chain, Gram-positive type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGTAG CAATAAAACC ATCAAATAAG TTCGGTAGTA TTTTTAGATA TATAATACTT
AACAGGAAAT CTAAAAAAAT AAAATGTATA TTAAAAGAAG ATGTTAATAT AGAACTGGAT
AAAGAAAAAT ATTTTGATGA AAAATTTAGT GAATTTCAGG TTGAGTTTGT TAAACCATTA
CCCCTGAAAA AAGAAATAAA GTTTATCTGG CCCCAGATTG TTGAAGAAGT AAATAAAAAA
TTTACTTACC TTAACGGATG GCTTTCCAGG GCTGAATTAC AGGTTAATGA GAGAAATATA
ATTACCATTA AAGTTGAAGG TAAGGTTGCC TGGAAGAGCC TCAATGACAC CAGGGTCAAA
AAGTATTTAA TAAACCGGAT ATCTTATTAT CTTGATAGGG AAATTAAAAT TGAAATAAAA
AATGGCGATT TTTTAAAAAG CCTGCCGGAG AGTAAACCCG ATTTGAATAG AATAAAAAAG
AAAAAAGTTA ATAAGACCGA CAAGAAAAAA AGAGGGAAGC ATAAGTCCGG TAGTGATACT
AATATTATAC TTGGAAACAG GATTAGAACA GAAGAAATTA CCCCGATTGA AGAAGTAAAA
CATGAAGGAC AGGGAGTAGT AATTAAAGGA GAGGTTTTCA ACCTGGAAGA ACGGGTAACC
AGGCGGGGAA AGTATTTATA TATTTTTGCT GTTACTGATA GAAGTAGTTC AATTACCTGT
AAGTTTTTTA TAGATGATAA ATCTGACCTT AAATCTACAT TAAATAATGA AGACTGGGTT
ATGGTCAAAG GTCGTGTTCA GTTTGATACC TATAGTAATG AAATTGTGAT AATGTGTAAT
TCAATAGAAA AAACAGAAGC CGAGGTTAGA GTAGATACTG CTGATGATAA GAGGATTGAA
TTACATTTAC ATACAAAGAT GAGTGCACTG GATTCAGTAG TTGATGTAGA AAAAGTAATA
GAAAGGGCTG CAGAATGGGG ACATTCTGCT ATTGCAATAA CTGACCATGG TGTGGTTCAG
GCCTATCCTG ATGCTTATCA GGCTGGCAAA AAGCATAATA TAAAGATCCT GTATGGGCTG
GAGGCATATA TGGTAGACGA CGGTGAGCCC ATCATTTTAA ATCCACCTGA TGTTTCTCTT
GAATCGGCTA CTTTTGTTGT ATTTGACCTG GAGACAACCG GGTTAAACAA ATTTAAAAAT
GAAATCATTG AAATCGGTGC CGTTAAAGTG AAATCGGGTA AGGTTATAGA TGAATTTTCA
AGCTTTGTTA AGCCCGGTGA AAGTATACCT AACAAAATTA CTGAGCTGAC CGGTATTACC
AATGAAATGG TGTCCAGGGC CCCTGATATT GAGGGGGTTA TTGGAGATTT CCTTGAATTC
ATAGATGGGT CTATTCTTGT GGCCCACAAT GCTGATTTTG ACTATGGTTT TCTCCAGGTG
GCCCTTAAAA AAACAGGTCA GGGGGATATA TCATATCCCG TTCTGGATAC CCTTACCCTC
AGCAGGGCTT TGTTACCTGA TTTATCTAAC CATAAATTGA ATACCCTGGC CAGACATTTA
AATGTAAGGC TTGATAATCA TCACCGGGCT GTTGAAGATG CCCGGGCTAC TTCCGAGATA
TTTATTAATT TTTTAAGTAA TATAAAAAAT GAGGGTATAG AAACTGTTCC CGGAATTAAT
CGTCTGTCGA CTAAAATAAA CTGGAGGGAA TTACCGACTT ATCATACTGT TATATTTGCC
AAAAACAAAC AGGGGTTAAA GGATATTTAT CGGCTGGTAT CGGAGTCTCA CCTCAATTAT
TTTTATAGAA AGCCAAGAAT CCTTAAAAGT CATTTAATTC AGTGCAGGAA AAACCTAATA
ATCGGGTCTG CCTGTGAAGC AGGTCAACTT TACAGGAGTA TAATTAATAA TAAACCCTAT
CGGGAAATCA TAAAGATAGC AAGTTTCTAT GATTACCTGG AGATACAGCC TACTGGTAAT
AATAAATTTC TGGTCGGTAA TAAAGTGGAA TCCATTGATG AGTTAGAAAA GATCAACTAT
CAGATTTATA AACTGGGGAA GAAATTAAAT AAACCGGTAG TAGCAACCTG TGATGTTCAT
TTTCTAGATC CTGAAGATGA TATTTATAGA AAGGTTCTCC AGGCCGGTCA GGGGTATGAT
GAAGCTGAGG AACAGGCCCC CCTTTATTTT AGAACAACCA ATGAGATGCT TGAGGAATTT
TCGTATCTTG GTAAAAAAGC CGCCCGGGAG GTTGTTATTG AAAATCCAGC AAAAATTTCT
GATCAGATTG AAGAATTGAA ACCCCTGCCT GATGGATTAT TTGCCCCTGA AATTGAAGGA
GCCAACGACC AGATACGAAA GATGACTTAT CAGAGAGCCC ATGAACTTTA TGGAGATCCC
CTGCCTTCAA TTATAGAGGA AAGACTTGAA AAGGAATTAA AGGCAATTAT AGATAATGGT
TATGCTGTTA TTTATCTAAT TTCTCATAAA CTAGTAAAAA AATCACTGGA AGACGGTTAT
CTGGTTGGTT CCAGGGGGTC AGTTGGTTCA TCACTGGTGG CTACAATGTG TGAGATTACC
GAGGTTAACC CCCTGCCCCC ACATTATCGA TGCCCACGGT GTAAACAGGT GGAGTTTGTT
AATGATGAAA ATACAGGGGT TGGGGCTGAC CTCCCCGATA AAAATTGTCC TCACTGTGGG
ACCAGGTATG TTAAAGATGG TTTTGATATT CCCTTTGAAG TATTTATGGG GTTTGAAGGA
GATAAAGTAC CTGATATTGA TTTAAACTTC TCTGGAGAGT ATCAGGGTGA GATCCATAAA
TATACTGAAG AGCTTTTTGG ATCTAACTAT GTTTTTAGAG CTGGAACCAT CTCTACTATA
GCCAAAAGAA CAGCTTTTGG ATTTGTAAAG GGTTATCTTG ATGATAATGG TTTAAGGTTA
AATAAAGCCG AGATTGACAG GCTTGTTAAA GGGTGTACCG GAGTAAAGCG GACAACAGGT
CAGCATCCCG GAGGTTTGAT GGTTGTTCCC AAAGCCTATG ATATTCATGA TTTTAGTCCT
ATCCAGCGCC CGGCCAATGA CCAGGAGACT GATGTAATTA CAACCCACTT TGATTATCAT
TCAATAAGCG GGAGAATATT AAAACTGGAT TTACTCGGCC ACGATGATCC GACAACCATA
AGAATGCTAC AGGATTTGAC CGGAGTAAAC CCTCATGATA TACCCTTAGA TGATCCTGAT
ACTATGGATA TCTTTTCCAG TACTGATCCT CTGGGTGTCA GTCCTGAAGA GATAGGTACT
GTTGTGGGTA CACTTGGAAT ACCGGAGTTT GGCACAAGTT TTGTAAGGCA AATGCTTGTT
GATACACGAC CAACTACCTT TGCTGAACTG GTGAGGATTA GTGGTTTATC CCATGGAACA
GATGTCTGGC TTAATAATGC CCAGGATTTA ATTAAAAGTG GGAAGGCCAG ACTTTCAGAG
GTTATCTCAG TCCGGGACGA TATAATGAAC TATCTAATTC AAAAAGGGCT GGAACCAGGT
AAATCCTTCT GGATAATGGA ACATGTCAGA AAAGGAAAAG GGTTAACAGA AGAAGAAGAA
CAATATATGC GGGAACATAA TGTGCCTGAC TGGTATATTG AATCATGTAA AAAGATTAAA
TATATGTTCC CCAAGGCTCA TGCAGCAGCC TATGTAATGA TGGCTTTCAG AATTGCATAT
TTTAAGGTTC ATTATCCGGA GGCATTTTAT ACTACCTACT TTACAATTAA AGCAGATGAT
TTTGATGCCC ATATGATAAA TCAGGGATAT GATCATATAA TTGAGGTAAA AAAGAACCTG
GAAGCCAGGG GTAATGATAT GACAGCGAAG GAGAAGGGAA TTTTGACTGT TCTCGAAATA
GTTATTGAAG CCATGGCCCG GGGGATAGAA TTTTTGCCTG TTGATCTCTA TAAATCAGAT
GCTACTAAAT TTAAATTAAC AGACAAGGGA TTATTACCCC CTCTGGTTAG TCTCCAGGGT
CTGGGAAGTA GTGCTGCTGA AAAGATTGCT GTAACCAGAC AAGAAGCGCC TTTTTCTTCT
GTAGAAGATC TGGTTAACAG GACCAGAATC AGTAAAACAG TAGTTGAAAT ACTGGAAGAA
CATGGCTCCC TGGATGGACT ACCGGAGCGG GATCAGTTAT CACTGTTTAA TTAA
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| Protein sequence | MLVAIKPSNK FGSIFRYIIL NRKSKKIKCI LKEDVNIELD KEKYFDEKFS EFQVEFVKPL
PLKKEIKFIW PQIVEEVNKK FTYLNGWLSR AELQVNERNI ITIKVEGKVA WKSLNDTRVK
KYLINRISYY LDREIKIEIK NGDFLKSLPE SKPDLNRIKK KKVNKTDKKK RGKHKSGSDT
NIILGNRIRT EEITPIEEVK HEGQGVVIKG EVFNLEERVT RRGKYLYIFA VTDRSSSITC
KFFIDDKSDL KSTLNNEDWV MVKGRVQFDT YSNEIVIMCN SIEKTEAEVR VDTADDKRIE
LHLHTKMSAL DSVVDVEKVI ERAAEWGHSA IAITDHGVVQ AYPDAYQAGK KHNIKILYGL
EAYMVDDGEP IILNPPDVSL ESATFVVFDL ETTGLNKFKN EIIEIGAVKV KSGKVIDEFS
SFVKPGESIP NKITELTGIT NEMVSRAPDI EGVIGDFLEF IDGSILVAHN ADFDYGFLQV
ALKKTGQGDI SYPVLDTLTL SRALLPDLSN HKLNTLARHL NVRLDNHHRA VEDARATSEI
FINFLSNIKN EGIETVPGIN RLSTKINWRE LPTYHTVIFA KNKQGLKDIY RLVSESHLNY
FYRKPRILKS HLIQCRKNLI IGSACEAGQL YRSIINNKPY REIIKIASFY DYLEIQPTGN
NKFLVGNKVE SIDELEKINY QIYKLGKKLN KPVVATCDVH FLDPEDDIYR KVLQAGQGYD
EAEEQAPLYF RTTNEMLEEF SYLGKKAARE VVIENPAKIS DQIEELKPLP DGLFAPEIEG
ANDQIRKMTY QRAHELYGDP LPSIIEERLE KELKAIIDNG YAVIYLISHK LVKKSLEDGY
LVGSRGSVGS SLVATMCEIT EVNPLPPHYR CPRCKQVEFV NDENTGVGAD LPDKNCPHCG
TRYVKDGFDI PFEVFMGFEG DKVPDIDLNF SGEYQGEIHK YTEELFGSNY VFRAGTISTI
AKRTAFGFVK GYLDDNGLRL NKAEIDRLVK GCTGVKRTTG QHPGGLMVVP KAYDIHDFSP
IQRPANDQET DVITTHFDYH SISGRILKLD LLGHDDPTTI RMLQDLTGVN PHDIPLDDPD
TMDIFSSTDP LGVSPEEIGT VVGTLGIPEF GTSFVRQMLV DTRPTTFAEL VRISGLSHGT
DVWLNNAQDL IKSGKARLSE VISVRDDIMN YLIQKGLEPG KSFWIMEHVR KGKGLTEEEE
QYMREHNVPD WYIESCKKIK YMFPKAHAAA YVMMAFRIAY FKVHYPEAFY TTYFTIKADD
FDAHMINQGY DHIIEVKKNL EARGNDMTAK EKGILTVLEI VIEAMARGIE FLPVDLYKSD
ATKFKLTDKG LLPPLVSLQG LGSSAAEKIA VTRQEAPFSS VEDLVNRTRI SKTVVEILEE
HGSLDGLPER DQLSLFN
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