Gene Hore_07320 details

Gene Information

• Locus tag: Hore_07320
• ID: 7312967
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothermothrix orenii H 168
• Kingdom: Bacteria
• Replicon accession: NC_011899
• Strand: +
• Start bp: 791249
• End bp: 791761
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 643611163
• Product: 16S rRNA processing protein RimM
• Protein accession: YP_002508484
• Protein GI: 220931576
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000000000000238844
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACGATA AAATGATTAC TATAGGTAAG GTCACAACCC ATCAGGGTAA TAAAGGGGAG 
GTAAGGGTCT TACCCCTTAC TGATTATCCT GAAAGATTTG AATTACTGGA ACAGGTATTT 
CTGGTCCGTG ATAACCGGGT TATTGAAAAG AGAGTTGAAC AAATTAGGTT TCACAAAAAA 
TTTGTAATTA TTAAATTTGA GGGTATTGAT GATATTGGGG CCGCCCTTGC ATATAAAGAT 
TACTTCATAA AAATACCACG GGAAGAAACT CTGGATCTTC CTGAAGGACA TTACTTTATC 
TTTGAATTAC TGGGATTTGA AGTTTATACA GATGAAGGTA TTTTTCTGGG TAAAGTTGTT 
GATATTATTA CTACCGGGGG AACCGATATC ATTAAAGTAA AAGGTGATAA AAAAGATTAT 
ATGGTTCCAG CTGCCCGGGA AATAGTAGTC AATATTAACC CGGATGAAGA GAAGATAATT 
ATTAAGCCCA TTCCAGGGTT ACTGGATTTG TAG 

 

Protein sequence

MNDKMITIGK VTTHQGNKGE VRVLPLTDYP ERFELLEQVF LVRDNRVIEK RVEQIRFHKK 
FVIIKFEGID DIGAALAYKD YFIKIPREET LDLPEGHYFI FELLGFEVYT DEGIFLGKVV 
DIITTGGTDI IKVKGDKKDY MVPAAREIVV NINPDEEKII IKPIPGLLDL