Gene Hore_07250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_07250 
Symbol 
ID7312960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp783170 
End bp786727 
Gene Length3558 bp 
Protein Length1185 aa 
Translation table11 
GC content36% 
IMG OID643611156 
Productchromosome segregation protein SMC 
Protein accessionYP_002508477 
Protein GI220931569 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type
[TIGR02169] chromosome segregation protein SMC, primarily archaeal type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000283351 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTAA AAAAACTGGA ACTAAAAGGT TTTAAGTCAT TTGCAAAACC AATAACCATT 
AATTTTGAAT CTCCCATAAC TGCCATTGTG GGGCCTAATG GTAGTGGGAA AAGTAATATT
GTAGATGCCA TAAGGTGGGT TCTGGGAGAG CAGAGTGCCA AAACCCTGAG AGGTAGCAGG
ATGGCTGATG TCATTTTTGC CGGTAGTAAA GATTATAAAG CTTTAAACAA GGCAAGTGTT
ACCCTTTATC TTGATAACCA GGATAAAATA CTGCCCCTGG ATGTAAGTAC GGTTAAAATC
AGTAGAAAAG TAAATATGGA TGGGCAGAGT GATTATTACC TCAATGGAAA GATATGTCGT
CTCAAAGATA TTGAGAATTT ATTGATGGAT ACCGGTCTGG GTAAGGATAC ATATTCTATA
GTAGGTCAGG GGAAGATTGA TTCTATAATT AACAGTAGAC CGGAGAAGTT AAGGGAGCTA
TTTGAAGAAG CGGCCGGGAT CAGTAAATAT AAGTCCCGTA AAATGGATGC TGAAAAGCGT
CTGGAGAAAA CAAACCATGA TCTTCAAAGG ATAGAGGATT TAATCTGGGA ACTTGAAAAA
CAGGTTGGGC CACTGGAAAA GGCAGCTCAA AAGGCCAAGA AGTACAGAAG GTTAAAAGAA
GAGTTAAAAG TTCTTGAAGT TAATTTGCTT TTAGATAAAT GGGATAAAAA TCTGGACAGG
CTATCTTCTT TTGAAGAAGA TGAACAACTA CTTATCCATA AATTAAAATC CTTAACAAAT
AATTTGACTG AAAGTCAGGA AAAACTTGAG TCTTTGCAAA GGACTCTGAA AGTAAAAAAA
GATGAATTAT CCAGACTGAG GGATAGATAC TACAGGCAGA AGTCTAAACG GGAAGAGGCT
GAAAATACCC TGTGTATTTT AGAAGAAAGG CGCCAGGGGC TGTCCAGGGA GAAAGAGAAT
TTGAATCAGG AAATAAAAGA TTTAAATCTC AGGAGAGAGG AATTAACCGG GAGACTGGAT
GAAATTGGTT CCAGGTTAAT AGAACTCAAG GAAAAAATAG ATAATTATAA TCAAAATTAT
GAATCTAAAA AAGTTTTGCT GGATGAAATC AAAGAGAACC TTGACCGGGA AAAACAGGAT
TTGTTTTTTC TCAGGAATAA TATCCTGGAT GGAAATGTAG AATTAAAGGA TATTTCATCC
CAGTTTGAAC AACTTAAAGA ACGGGGCAGG CACCTGGAAG AAGAAATCAA AAGGATAAAA
ACAACACGGG ATAAAATCAG CAGTGAGTAT GATGCCCTTA ATGAGAGAGA GGATAAACTG
AGAACCTATC TAAAATCAGT TGATAACAAG ATAGAAGAAA AGAGGTCTGT TTTAACAGAC
CTTAAAGAGG AAGAATTGAA TTTACAGGCC AGACTGGAAG AGGCTAAAAA GAGGTTTAAC
AGGACCAGAA ATAAATTAAA CGAGAAAAAC TCCCACTTAA GTATTTTACA CGAGATGGAG
GATTCCCTGG AAGGGTATTA TCGTGGTGTT AAGAATATAC TTAAAGCCAG GTCAAAGCTT
ACGGGTATTA TTGGAGTTGT CGCTGACCAG ATAGAAGTTG ACAAGAAATA TGAACTTGCG
ATTGAAACAG CCCTCGGTGG AAGGCTCCAG AATATAATAG TAAAAGATGA TAAGTCAGCC
CGGGAATGTG TTGATTATTT AAAAGAAACA AAAGGTGGAC AGGCAACATT CCTTCCTGTA
AATATGGTCA ACGGGCGAAA GGTTAATTTT AAAAACAATC AGGTAAAGAA GGTCGATGGT
TTTCTGGGTA TTGCTTCATC TTTTGTAGAC TGTGAGGATT ACCTTAAGCC GGTAATTGAG
TACCTTCTTG GCCGGACGAT AATATCCACC GATCTGAAGT CTGCAATTGA AATAGCCAGG
CTTAGAAAAA GGGGATTTAA GATCGTAACC CTTGAGGGTG ATGTTATTAA TTCCGGGGGG
GCAATTACAG GTGGTAGTAA GAATAGTAAT AAAAAGATGC TTTTAAGCAG GAGTAGAAAA
ATAGAGGATT TGAAAAAAGA AGTATTAAAA TTACAAAATT CTCTCGGTGA GGATTCTAAA
AACTTAAACC AGCTTGAAAA CAAACTTAAA GAGGTTTTGA ATAAAAAAGA AGTAATTAAA
AATGATATCC GTGACCTTGA AATAGAAAAA AATAATTATC ATAAAGATCT AATAAGACTG
GAACAGGAAA AGACAAAACT TAGTGAAAGA CTGGAAGAAA TAGATGAAGA GTTTGTTGAT
TGTCATGATC GACTTGGCAA AAATGATGCC GCAAAGCAGA AACTTGAAGA TAAATTGAAG
GCTTTAAACG ATGATTTTAG CCTTGAAAAA AATGAAATTG AAAATAAAGA AAAACGGGTT
GAGGAACTCG AAGCAAGGCA TGAAAATATA AATGATGAGA TAACCAGGTT AAAAATTAAC
CTTGCCCAGC TTAATGAAAA AAGAGAGAGC CTGCGTAAGG AAGAGGAGAA AAGTAATAAA
GAACTTATTG AGCTGGCAGA AAAGAATGAG GAGTTCAAAG AGCGATATAA TAAAATTCTC
TCTGAAATAA AGGGTATAAA TAATAAAGAA GGTCAGTTAA ATGAATTAAA AGTAAAATTA
AGTGGGGAAA TTGAAAAACT AAAAAATGAT CTTAACCTTA CTGAAAAAGA AGTTGAAGAA
AAACAGCAAA GAATAGATAT GTTACAGAGA GAAGTAAGTG ATTTACAAAC CAGGTTAGAT
AAAAAGAAGG ATGAAAAACA TCAAATTGAA TTAAAGATAA CAAGGTTGGA AAACAGGAAT
GAAAGAATTG TAGAAATCCT TGAAAATGAT TATGATGTTA AACCGGAAGA TGGTTTTGAT
GACAGAATCA AAATCACTAA CTACTCACGG GCCGGACAAA AGGTAAAAGA ACTCAAAAAT
GCGATAAAAA AACTGGGAAC TGTTAATCAG GGAGCCATTG AGGAGTATAA TGACCTGGTT
GACAGGCTGG ATTATTTACA GAATCAGCAT GATGATCTTC TTAAAGCTAA AGAATCAATT
ACAAAAGTCA TACAGGAAAT TGAAGAGACC ATGTCCAGTC TCTTCCACGA GGCTTTTCTC
AAGGTAAATG GGGAGTTTAA CAATACTTTT AAAGAGTTAT TTAATGGTGG GCAGGCCAGT
TTGAAATTGA CTGAACCTGA AAACCTTCTG GAAACAGGTG TTGAAATTGT GGCCCAACCC
CCGGGTAAGC AGCTGAAGAA ACTCTCTTTG ATGTCAGGTG GGGAGAGGGC ATTAACGGCT
ATTGCCCTGG TATTTGCTTT CTTAAAAGTA AACCCCAGTC CTTTTTATAT ACTTGATGAA
ATTGATGCTC CCCTGGATGA TGCCAATGTA ACCAGATTTG CCCGGTATAT TAAAGAATAT
TCCCGGTTTG CTCAGTTTTT GATTGTAACC CATCGTAAGA ATATGATGGC TGAAGCTGAG
ACCATATACG GGGTAACAAT GGAGGAATCA GGGGTATCAA AATTAATTTC ACTTAAACTC
AGTGAACAAA TTATTTAA
 
Protein sequence
MFLKKLELKG FKSFAKPITI NFESPITAIV GPNGSGKSNI VDAIRWVLGE QSAKTLRGSR 
MADVIFAGSK DYKALNKASV TLYLDNQDKI LPLDVSTVKI SRKVNMDGQS DYYLNGKICR
LKDIENLLMD TGLGKDTYSI VGQGKIDSII NSRPEKLREL FEEAAGISKY KSRKMDAEKR
LEKTNHDLQR IEDLIWELEK QVGPLEKAAQ KAKKYRRLKE ELKVLEVNLL LDKWDKNLDR
LSSFEEDEQL LIHKLKSLTN NLTESQEKLE SLQRTLKVKK DELSRLRDRY YRQKSKREEA
ENTLCILEER RQGLSREKEN LNQEIKDLNL RREELTGRLD EIGSRLIELK EKIDNYNQNY
ESKKVLLDEI KENLDREKQD LFFLRNNILD GNVELKDISS QFEQLKERGR HLEEEIKRIK
TTRDKISSEY DALNEREDKL RTYLKSVDNK IEEKRSVLTD LKEEELNLQA RLEEAKKRFN
RTRNKLNEKN SHLSILHEME DSLEGYYRGV KNILKARSKL TGIIGVVADQ IEVDKKYELA
IETALGGRLQ NIIVKDDKSA RECVDYLKET KGGQATFLPV NMVNGRKVNF KNNQVKKVDG
FLGIASSFVD CEDYLKPVIE YLLGRTIIST DLKSAIEIAR LRKRGFKIVT LEGDVINSGG
AITGGSKNSN KKMLLSRSRK IEDLKKEVLK LQNSLGEDSK NLNQLENKLK EVLNKKEVIK
NDIRDLEIEK NNYHKDLIRL EQEKTKLSER LEEIDEEFVD CHDRLGKNDA AKQKLEDKLK
ALNDDFSLEK NEIENKEKRV EELEARHENI NDEITRLKIN LAQLNEKRES LRKEEEKSNK
ELIELAEKNE EFKERYNKIL SEIKGINNKE GQLNELKVKL SGEIEKLKND LNLTEKEVEE
KQQRIDMLQR EVSDLQTRLD KKKDEKHQIE LKITRLENRN ERIVEILEND YDVKPEDGFD
DRIKITNYSR AGQKVKELKN AIKKLGTVNQ GAIEEYNDLV DRLDYLQNQH DDLLKAKESI
TKVIQEIEET MSSLFHEAFL KVNGEFNNTF KELFNGGQAS LKLTEPENLL ETGVEIVAQP
PGKQLKKLSL MSGGERALTA IALVFAFLKV NPSPFYILDE IDAPLDDANV TRFARYIKEY
SRFAQFLIVT HRKNMMAEAE TIYGVTMEES GVSKLISLKL SEQII