| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_07230 |
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| Symbol | |
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| ID | 7312958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 781748 |
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| End bp | 782461 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643611154 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_002508475 |
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| Protein GI | 220931567 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000000010493 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAGAC TACAAAAATA CATGGCCCAT GCTGGGGTAG CTTCCCGTCG TAAGTCCGAA
AAAATAATTA CTCAGGGGAG AGTAAAAGTT AATGGAAAAA TTGTAACTGA ACTTGGTACC
AAGATAGATC CCGATAAGGA TATTGTTGAG GTAGATGGTA GGGTTATAAG CAAGGAAAAG
TATGTATATA TACTTTTAAA TAAACCGGTC GGTTATATTA CTTCAGTATC TGATCCCCAT
GGGAGAAAAA CTGTTACCGG GCTGATTAAA GGTGTTTCCC AGCGTATTTA CCCGGTGGGC
AGGCTTGATT ATGATACCAG TGGGTTATTG ATACTGACAA ATGATGGTGA GTTAACATAT
GTTTTAACTC ATCCTTCCCA TATGGTTGAA AAAACATATC GGGTTGAGGT CAAAGGTTTT
CCTTCTGATG AAGTTTTGAA GAAACTGGAG ACAGGGGTCA AATTAAAAGA TGGTCTTACT
GCTCCGGCCC GGGTGTCGGC AGTAAAAAGG AAAGAGAAGA ACACAATTTT TAACCTGACC
ATCCATGAGG GTAGAAACAG GCAGGTAAGA AGAATGTGTG ATAAAATTGG ATTTCCTGTA
GTTAACTTAA AAAGAATTGC CTTTGGTCCC CTCAATCTCA AAGGGCTTAA AACCGGACAG
TACAGATTTC TCACTGAAAA AGAAGTTAAA GCCTTAAAGA ACATAAAAGA ATAA
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| Protein sequence | MERLQKYMAH AGVASRRKSE KIITQGRVKV NGKIVTELGT KIDPDKDIVE VDGRVISKEK
YVYILLNKPV GYITSVSDPH GRKTVTGLIK GVSQRIYPVG RLDYDTSGLL ILTNDGELTY
VLTHPSHMVE KTYRVEVKGF PSDEVLKKLE TGVKLKDGLT APARVSAVKR KEKNTIFNLT
IHEGRNRQVR RMCDKIGFPV VNLKRIAFGP LNLKGLKTGQ YRFLTEKEVK ALKNIKE
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