Gene Hore_07180 details

Gene Information

• Locus tag: Hore_07180
• ID: 7312953
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothermothrix orenii H 168
• Kingdom: Bacteria
• Replicon accession: NC_011899
• Strand: +
• Start bp: 777599
• End bp: 778138
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 643611149
• Product: putative transcriptional regulator
• Protein accession: YP_002508470
• Protein GI: 220931562
• COG category: [K] Transcription
• COG ID: [COG1386] Predicted transcriptional regulator containing the HTH domain
• TIGRFAM ID: [TIGR00281] segregation and condensation protein B

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.00000744296
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGTTG GAAATCTGGC AAAGCTGGAG GCATTATTGT TTACATCACC GGAACCGGTC 
TCCCCGGGAG AGATAGCCCG GGCTGCAGAT ATGTCAGAAA GTGAAGTCAG GAAATATTTA 
AAAATTCTTA CCAGAGAATT TGATAAAAAG TCCCACGGAA TCCAGGTTAA GGAGTATAAT 
GACAGGTACT TTTTTGTTAC TAAACCAGAG TTTTCTTCAT ATATAAAAAG CTTACATAAT 
AAACCGGGTT CCATTCGCTT AAGCCAGGCT GCTCTGGAGA CTCTGGCTAT CATTGCATAT 
AAACAACCAA TTACCAGGGC TGAAATAGAA GAAATCAGGG GGGTTAAAGC TGAAAAGACC 
CTTTTGACCC TGGGGAAGTA TGGACTTATC AGGGAACTGG GGAGAAAAGA AACAACCGGT 
AATCCCATTG TTTATGGGAC CACGGAAAAA TTTTTACAAT ATCTTGATAT AAAAGACCTC 
TCACAACTTC CTGATTTAGA GCAGTTTTAT GAGGAGATAA ATGAAAATCA GGGTCAATAG 

 

Protein sequence

MDVGNLAKLE ALLFTSPEPV SPGEIARAAD MSESEVRKYL KILTREFDKK SHGIQVKEYN 
DRYFFVTKPE FSSYIKSLHN KPGSIRLSQA ALETLAIIAY KQPITRAEIE EIRGVKAEKT 
LLTLGKYGLI RELGRKETTG NPIVYGTTEK FLQYLDIKDL SQLPDLEQFY EEINENQGQ