Gene Hore_07170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_07170 
Symbol 
ID7312952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp776859 
End bp777590 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content36% 
IMG OID643611148 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_002508469 
Protein GI220931561 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000172776 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGAAG TTCAGCTGGA CAAATTTCAG GGTCCTCTGG AATTGCTTTA TCAGCTTGTA 
AAAAAAAATA AAATTGAAAT CAGTGAGATA TCTCTGGCCC GGATTACCGA ACAGTATCTG
GAATACATAG AACACTACCG TGACTTCAAC CTGGAGATGG CCAGTGAATT TATGGTTATA
GCTTCAGAAT TAATAGAGTT AAAGGTAAAA AGCCTTCTTC CTGACAGTGA GGAAGATTCT
ACAGAAGAGG AGAAAGGCAA GACCATCGTT CAGAGGTTAA AGGATTATCA TGTATTTAAA
AAAGTTACCG AACTATTCAG GGAGTATGAA AAGGCTGCCG GGCAAATATA TTCAAAACCG
GTTAATCTCG ATAAATATGT TGATAATGAG GTAAATTATG AGATTGATAT AGATATATCT
GAGCTGGTAG AAGCCTTTAA AAAAGCTATG TCCTCTACTG ACGGGGTTGA GGTTTTTGAA
GGTGACAGGA ACCTTAAAAA AATAGAATCA GAGGAAATAA AGATACAGGA TAAAATGGAC
CAAATTCTTG AATTATTTAA CCAGAATCCA GATCAGGGAT TAACCTTTTC CCAGTTGGTA
AGTGGTAATC CAAGTAAAAT GGAAATTGTG GTTACATTTC TCAGTATTCT GGAGCTAACC
AAGTTAAGGA AAATAGAAAT AAAGCAGGAA AAATTATTCT CTGATATAAA TCTAAGGTCA
AAAGCAGGGT AG
 
Protein sequence
MYEVQLDKFQ GPLELLYQLV KKNKIEISEI SLARITEQYL EYIEHYRDFN LEMASEFMVI 
ASELIELKVK SLLPDSEEDS TEEEKGKTIV QRLKDYHVFK KVTELFREYE KAAGQIYSKP
VNLDKYVDNE VNYEIDIDIS ELVEAFKKAM SSTDGVEVFE GDRNLKKIES EEIKIQDKMD
QILELFNQNP DQGLTFSQLV SGNPSKMEIV VTFLSILELT KLRKIEIKQE KLFSDINLRS
KAG