| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_07140 |
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| Symbol | |
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| ID | 7312949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 772043 |
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| End bp | 773389 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643611145 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_002508466 |
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| Protein GI | 220931558 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.993125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGGTTGT ATGGAACCAT GGAAATTAGT AATTCAGGGG TACTTCATAT CGGAGGTATT
AGTACAGTAG ACCTTGTTGA AAAATATGGG ACTCCCCTCC TTGTTTTTGA TGAGTGGGAG
ATCCGTAAAA AGGCCCGTGA ATATGTAAAA GCCTTTAATA AATATTACCC CAACTCCAGG
ACAGTCTATG CCAGTAAGGC TTTTTTAAAC CAGGCTTTAT GTTATATTAT TGAAGAAGAA
GGACTGGGGT TAGATGTAGT TTCAGGGGGT GAGTTATATA TTGCCCTCAA AGCAGGATTT
CCACCTGAAA AAATCTTTTT CCATGGTAAT AATAAGTCAA ATGCTGAAAT TAAAATGGCA
GTTGAGGCCG GTATAGGACG TTTTATGCTG GATAATTTAA AAGAAGCCAG ATATATTAAT
AAAGTGGCCG GTAGACTGGA GAAAAGTATC AAGGCCATTT TACGGGTTAC CCCGGGAATT
GAGGCCCATA CCCATGAATT TATCCAGACC GGTCAGATAG ATTCAAAGTT TGGAGTAAGT
GTTTACCGGG ATCAGGCTTT AAAAGCAATT GAAGAGATAA TAAGAATGGA TAATATAGAA
CTGACGGGAG TTCATGTTCA CATTGGTTCA CAGATTTTTA ATTTAACTTC CTTTAGCAGG
ACTATAGATG TTATGTTTGA ATTTATGAAT AATGTCAGGG ATAAAACCGG GTATATCTTA
AAAGAACTGG ATCTGGGAGG AGGTCTGGGT ATACCATATA CTGAGGATGA ACCTGATCCC
GGTATTGATG AATATGCCAG ACTGGTTTCA GAGAAAGTCA GAGAAAAAAG TCATGAATTT
GATTATCCAC TCCCGGTAAT TATTAACGAA CCCGGCAGAT CTATAATCGG TACAGCCGGA
ACTACTTTAT ATACGGTAGG GACGGTAAAG GAGATACCCT TTATCCGGAA ATACCTCGCT
GTAGATGGAG GTATGACCGA TAATATTAGA CCAGCCCTTT ATGGGGCAGA ATATGATGCT
ATTTTAGCCA ACCGGGCCGA TGATGAACGG GAAGAGATTG TTTCCATTGC CGGTAAATGC
TGTGAATCAG GTGATATTCT TATTCATGAT ATTAAAATGC CGGAAGCCAG GGAAGGAGAC
ATTATAGCAA TTCCCTGTAC AGGGGCCTAC ACTTATGCCA TGTCAAGTAA CTATAATGGA
TTAAGGAGAC CGGCAGTGGT TCTTGTCAAT GATGGGAATG CAGACCTGAT AATTAAGCGA
GAATCCTATG AGGATCTGAT AAAAAATGAT ATAGTCCCGG CTCGATTGCG AAAAATAAAA
CTAAAAAAAG TTGTTTCCCA TGGCTAG
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| Protein sequence | MRLYGTMEIS NSGVLHIGGI STVDLVEKYG TPLLVFDEWE IRKKAREYVK AFNKYYPNSR
TVYASKAFLN QALCYIIEEE GLGLDVVSGG ELYIALKAGF PPEKIFFHGN NKSNAEIKMA
VEAGIGRFML DNLKEARYIN KVAGRLEKSI KAILRVTPGI EAHTHEFIQT GQIDSKFGVS
VYRDQALKAI EEIIRMDNIE LTGVHVHIGS QIFNLTSFSR TIDVMFEFMN NVRDKTGYIL
KELDLGGGLG IPYTEDEPDP GIDEYARLVS EKVREKSHEF DYPLPVIINE PGRSIIGTAG
TTLYTVGTVK EIPFIRKYLA VDGGMTDNIR PALYGAEYDA ILANRADDER EEIVSIAGKC
CESGDILIHD IKMPEAREGD IIAIPCTGAY TYAMSSNYNG LRRPAVVLVN DGNADLIIKR
ESYEDLIKND IVPARLRKIK LKKVVSHG
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