| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_07020 |
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| Symbol | |
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| ID | 7312937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 761241 |
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| End bp | 762014 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643611133 |
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| Product | sporulation sigma factor SigF |
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| Protein accession | YP_002508454 |
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| Protein GI | 220931546 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATACA GTATTATCAA CCTTCCCAAA GTAAGGTTGT TAAGTGAGGA GGAGACCAGG
CATTACATTA AGAAGGCCCA GAATAATGAC CAAAAGGCCC TGGATAAGTT AGTTGAACAT
AATTTAAGAC TGGTCCTGAA AGTAATAAAT CGTTTCAAAA GCTCTGGTTA TGATCCCCAG
GATTTATTTC AGATCGGGGT TATTGGATTA ATCAAGGCTA TAAAAAATTT TGATTTAGAC
CGGGGAGTAA AGTTCTCAAC ATATGCTGTG TCCAGGATTA TTGGAGAAAT TAGATTACAT
ATCAGGGATG ATGGGATAAT AAAGGTTAGC CGCTCCCTTA AGAAAATTGC TAATGATGTC
AGAAAAAAAG AAGAAGAATT AAAAAAGAAA AATAATTGTT CTCCCAGTAT TTTAGAACTT
TCAAAAAAAA CTGGTTATAG TAAGGAAGAG ATTGTCCAGG CCCTTGAAGC CAATAAAGCC
CCAACTTCTA TATATGAAAC AGTTTATGAA GATGATGGTT CTGAATTATA TGTTGTGGAT
AATCTTGCTA ACGAGAGTAA AGATGAAGAA AAGATACCTG ATTTCAATAA AATTTTGCTG
GTTGACCTGT TAAAAAAACT TGATGAACGG TCACGAAAAA TTATTTACCT GCGTTATTTT
GAGGACAAAA CCCAGCAGGA AGTAGCTGAT GAAATAGGGG TATCCCAGGT TCAAATATCA
CGGCTTGAGA AAAAAATACT TCATAAGTTA AGGGATAATC TTGAAGAATC TTAA
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| Protein sequence | MEYSIINLPK VRLLSEEETR HYIKKAQNND QKALDKLVEH NLRLVLKVIN RFKSSGYDPQ
DLFQIGVIGL IKAIKNFDLD RGVKFSTYAV SRIIGEIRLH IRDDGIIKVS RSLKKIANDV
RKKEEELKKK NNCSPSILEL SKKTGYSKEE IVQALEANKA PTSIYETVYE DDGSELYVVD
NLANESKDEE KIPDFNKILL VDLLKKLDER SRKIIYLRYF EDKTQQEVAD EIGVSQVQIS
RLEKKILHKL RDNLEES
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