Gene Hore_06980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_06980 
Symbol 
ID7312933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp757580 
End bp758773 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content38% 
IMG OID643611129 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_002508450 
Protein GI220931542 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTGCA GGGTTAATAA AGGAAAATTT ATTAATATAA TCTTATTCTT TTTTTTATTT 
ATTCTGGTAT TCCCCTTTTA TACCATGGCA GAACAACCGT CTTTTGATTT AACAGCAAAA
TCAGCCCTAT TGATGCAGGT TAATACAGGT GAAATTCTTT ATGAGAAGAA TCCTCATCAA
AAATTACCAC CGGCAAGTAT GACAAAAATT ATGACAATGT TATTAGTAAT GGAAGCCCTT
GAAGATGGAA GAGCCAGCTT GAGAGATTCC ATCATAGTCA GTGAGAGGGC AGCCAGTATG
GGTGGGTCAC AGGTTTACCT GGAACCGGGT GAAGAGATGA CTCTTGAAGA CCTGATGAAG
GCTATAGCCA TAGCCTCTGC CAATGATGCC TGTGTTGCCG TTGCTGAATA CCTGTACGGT
ACTGAAGAGG ACTTTGTTAA AAAAATGAAT GAAAAAGCCC GGGAACTGGG ATGTAAAAAT
ACATACTTTT ATAATACAAA TGGTCTCCCC CCTGGTGACC CCTCTGTAGA AGGAAACTAT
ACTTCAGCTT ACGATCTGGC GATTATGTCC CGGGAGTTAT TAAAATATCC AGAGGTACTT
AAATGGACGT CAACCTGGAT AGATTACCTC CGGGATGGGG AATTTGTCTT AAATAACACC
AACAGGCTGG TTAGACATTA TAAAGGTGTT GATGGTATAA AAACCGGGTA TACGGAAGAG
GCTAAATTCT GTGTAGCGAC TACTGCGGCC AGGAATGGTA TCAGGTTTAT TGCTGTTATT
ATGGGGGCTG ATACTTCAAA GGCAAGATTT AAAGAGGCTG CCCAGCTTCT TTCTTATGGG
TTTAGTAAAT ACAGGAGCTT TATCGTAGCC GATAAAGAAG AAGTAATAGA TGAAATAACT
ATTCAAAACG CCAAGAATGA ACAGGCCCGG GTTTTAACCA GAAATAAAGT AGTAATCCCT
GTAAAAAAGG GAGAAGAGGA TGAAATAACG AAAAAAATTA TAATAAAAGA AAACATAAAG
GCCCCCCTGA AAAAGGGAGA TTCAGTAGGT AAAATCAGGA TATATAAAGG TAATTTATTA
TTAAAGGAAG CGGATCTTGT CATTGATAGA GATGTAACCA GGGCTTCGTT GTGGCAAATG
ATAACTAGAA TAATCAAAAT GATGGTAACC AGTCTGGTTA AACTTTTTAC TTGA
 
Protein sequence
MFCRVNKGKF INIILFFFLF ILVFPFYTMA EQPSFDLTAK SALLMQVNTG EILYEKNPHQ 
KLPPASMTKI MTMLLVMEAL EDGRASLRDS IIVSERAASM GGSQVYLEPG EEMTLEDLMK
AIAIASANDA CVAVAEYLYG TEEDFVKKMN EKARELGCKN TYFYNTNGLP PGDPSVEGNY
TSAYDLAIMS RELLKYPEVL KWTSTWIDYL RDGEFVLNNT NRLVRHYKGV DGIKTGYTEE
AKFCVATTAA RNGIRFIAVI MGADTSKARF KEAAQLLSYG FSKYRSFIVA DKEEVIDEIT
IQNAKNEQAR VLTRNKVVIP VKKGEEDEIT KKIIIKENIK APLKKGDSVG KIRIYKGNLL
LKEADLVIDR DVTRASLWQM ITRIIKMMVT SLVKLFT