| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_06940 |
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| Symbol | |
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| ID | 7312929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 751937 |
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| End bp | 753700 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643611125 |
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| Product | glycogen/starch synthase, ADP-glucose type |
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| Protein accession | YP_002508446 |
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| Protein GI | 220931538 |
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| COG category | [G] Carbohydrate transport and metabolism
[L] Replication, recombination and repair |
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| COG ID | [COG0297] Glycogen synthase
[COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein
[TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.1185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGTCAA AATTAAAAGT ATTATTTGTT TCGTCTGAAG TATCGCCTTT TGTTAAAACC
GGTGGTTTAG CAGATGTTGC CGGCTCTTTA CCGGTGGCTT TAAAGGAACT GGGCCATGAT
GTTAATATAG TTATGCCGGA ATATAAACAG ATTCCTGAAT ACTATAAAGA GCAGCTCGAA
CATGTCTTGC ATTTTAGAAC CAGGGTAGTC TGGAGAGATG AATATGTAGG TATCAATAAA
CTGGATAATA ACGGTGTTAC AACCTATCTG GTTGATAACA AAAATTATTT TTACCGGGAC
AGTCTTTACG AAAATGAAGA TAAGCATATC CAGTTCACTT ATTTCTGCCG GGCTATTATA
GAAATGTTAC CTAAAATTGG GTTCAAACCA GATATTATTC ACTGTAATGA CTGGCAGACC
GGTCCCCTGT GTATTATGCT CAAGGATAAT TATAAACAAT TTGATTTTTA TAAAAATATA
AAAACAGTTT TTACAATCCA TAACCTTCAA TATCAAGGTA AGTTTGGTTA TGACATACTG
GAAGATGTCC TGGGAATAAG TCATCATTAC TGGGACAATG GTGTTGTAAG GCATGATGGG
TTGATAAATT TCATGAAAAT GGGAATTATG GAGTCTGATG CTGTTACCAC CGTTAGTCAT
ACCTATGCTG AAGAGATTAA AGATCCGTAT TATGGTTATG GGTTAGATTA TGCGGTACGT
TTAAGGGGTA ATGATTTATA TGGAATTCTA AATGGAATCA GTTATGATGA TTTCAATCCA
GCAACAGACA CCAGGATATA CACTAACTAT GATTTAAATA AACCGGAAGG AAAATATGAG
AATAAAGCCA GGCTTCAGGA AGAACTGGGC TTGCCCGTAA GGGAGGATGT TCCTGTAATC
GGAATGGTAT CCAGGTTAGT GGAACAAAAA GGACTCGATC TTGTAATCCA TATCCTTGAT
GAATTAATGC AGGACGATAT TCAGTTCGTA GTCCTGGGTA CAGGTAATAA CAAATACGAA
CATGTTTTCT GGGAATATGG TAATCGCTAT CCCGAAAAAA TCTCTGTTAA TTTAAAATAT
GACCCTGTTC TGGCCCAGAA GATATATGCC GGTAGTGATA TTTTCTTGAT GCCATCCCGC
TTTGAACCCT GTGGTCTGGG GCAGCTTATA AGTCTCAGAT ATGGAACCAT TCCAGTTGTA
AGAGAAACGG GAGGACTTAA AGATACAGTA AAACCTTATA ATGAATATAC AGGTGAAGGG
AATGGCTTCA GTTTTGCAAA TTATAATGCC CATGATATGT TGTATACCAT TAGAAGAGCT
GTAGGTTTTT ATCATGATAA GGATGTCTGG AATAAACTGG TCAGGAGAGC CCTCTCAAGT
GATTTTAGCT GGAAAAGGTC AGCACTGGAA TATGAAAATC TTTATCATAA ATTAACTGGT
AAACAGGGTG TTAAACGGGA AGATAACCAG GAAAGTAATA ATCAAAATAC AGTACCTTTA
AATGGGGTAG AAAAGTCTTT TGATCAGGAG AAAATGAATA GAGATGAAAT TGCCGCTACT
GCTGTAACTT CTGATAAAAT CAATATAAAT AAGGCTGCTG CTTCACAACT TCAAAAGCTC
GATGGTATTG GTCCTGCCTT TGCGAAAAGA ATAGTTGAAT ACAGGCAAAA ACAAGGTAGA
TTTAAGACAA TTAAAGATAT AACTAAAGTA AAGGGAATAA GTAAATCAAA ATATAATAAT
ATAAAAGATG ATATTACAGT TTAA
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| Protein sequence | MGSKLKVLFV SSEVSPFVKT GGLADVAGSL PVALKELGHD VNIVMPEYKQ IPEYYKEQLE
HVLHFRTRVV WRDEYVGINK LDNNGVTTYL VDNKNYFYRD SLYENEDKHI QFTYFCRAII
EMLPKIGFKP DIIHCNDWQT GPLCIMLKDN YKQFDFYKNI KTVFTIHNLQ YQGKFGYDIL
EDVLGISHHY WDNGVVRHDG LINFMKMGIM ESDAVTTVSH TYAEEIKDPY YGYGLDYAVR
LRGNDLYGIL NGISYDDFNP ATDTRIYTNY DLNKPEGKYE NKARLQEELG LPVREDVPVI
GMVSRLVEQK GLDLVIHILD ELMQDDIQFV VLGTGNNKYE HVFWEYGNRY PEKISVNLKY
DPVLAQKIYA GSDIFLMPSR FEPCGLGQLI SLRYGTIPVV RETGGLKDTV KPYNEYTGEG
NGFSFANYNA HDMLYTIRRA VGFYHDKDVW NKLVRRALSS DFSWKRSALE YENLYHKLTG
KQGVKREDNQ ESNNQNTVPL NGVEKSFDQE KMNRDEIAAT AVTSDKININ KAAASQLQKL
DGIGPAFAKR IVEYRQKQGR FKTIKDITKV KGISKSKYNN IKDDITV
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