Gene Hore_06900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_06900 
Symbol 
ID7312925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp745890 
End bp747326 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content37% 
IMG OID643611121 
Productglycogen/starch synthase, ADP-glucose type 
Protein accessionYP_002508442 
Protein GI220931534 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0297] Glycogen synthase 
TIGRFAM ID[TIGR02095] glycogen/starch synthases, ADP-glucose type 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAC TATTTGTCGC TGCCGAATCT TATCCATTTA TTAAAGTCGG AGGTCTGGGG 
GATGTTGTCG GGTCGTTGCC ATTAGCATTA AAAAAACAGG GCCATGATGT CAGGGTTATG
ATACCGAAAT ACGGTTCTAT TCCCGAAAAA TACAAATCAC AAATGGGTTA CATAAATAGC
CTCGTTGTAC CCCTTGCCTG GCGTAAACAA TTTTGTACCC TGGAGGGGAC TACCTTTAAA
GGAGTCCCCT TCTATTTTGT CGATAACAGT TATTATTTTA ACCGGACCAG GATATATGGC
TACCATGATG ATGCCGAAAG ATTTGCCTTC CTTTCCCGGG CGGCCCTGTA TATTCTGCCA
ATTTTAGGTT TTAAACCAGA TATCATACAT TGCCATGACT GGCATACCGG GTTGCTCCCC
GTCTTTTTGA AGGATCATTT TAGCCAGAAA AAATTTTATC ATCATATGAA AACAATATTA
ACAATCCATA ACCTCAAATT TCAGGGGGTA TTCCCCGAAA ATATCCTTGA AGATATACTG
GGACTTGATT ATATCTATTT CAAACCCGAT GGCGTGGAAT TTTTTGGACA GGTTAATTTC
CTTAAAGGAG GGTTAATTTT TTCTGATATC ATAACTACAG TCAGTAATAA CTATGCTGAA
GAAATAACAA CTCCAGAATA TGGGGAACAA CTTCACGGTG TTTTAAAATC AAGGTCAAAG
GAACTTTTTG GAATTATGAA TGGACTGGAT TATGAAGAAT ATAATCCTGA AACAGACCCC
TACCTCTACC AAAATTTCAG TCTGAAAAAT CCTGTTCGGA AAATAAAAAA CAAATTAAAA
CTCCAACAAG AACTGGGTTT ACCTGTTGAC AAAAACACCC CTGTTATTTC AGTAATTTCA
AGATTATATA AACAAAAAGG AATTGATTTG CTGGTACAGG CCCTGCCCCA CATCCTCTCC
CGAAATATAC AGTTTATTTT ACTGGGAACC GGAGATAAAA ACTATGAACT CTTCTTTAAG
GAAGCCCGTT TTGCATATGG GACAAATCTT TCTGTCAATA TTAAATTTGA TAATGAGCTG
GCCAGAAAAA TTTATGCTGG TTCAGACATT TTTCTTATGC CTTCTCTATT TGAACCCTGT
GGCCTCGGCC AGTTAATAGC GATGCGATAT GGCACTATAC CAATTGTCCG GAAGACTGGA
GGCCTTAAGG ACTCTGTTAA ACCATTTGAT CCTGACTCTG GAACAGGTAA TGGCTTTTTG
TTTGATGAAT TTAACTCTAA AAGTATGTTA AAAGCAATAG ATGAAGCCCT TACAATATAT
AAAAATAAAA ACCTGTGGAA TACCATCAGA GAAAATAATT TAAAGACAGA CTTTAGCTGG
AAACAATCAG CCCTGAAATA TCAAAAATTA TATAAAAAAT TAATCAATGT TAATTAA
 
Protein sequence
MKILFVAAES YPFIKVGGLG DVVGSLPLAL KKQGHDVRVM IPKYGSIPEK YKSQMGYINS 
LVVPLAWRKQ FCTLEGTTFK GVPFYFVDNS YYFNRTRIYG YHDDAERFAF LSRAALYILP
ILGFKPDIIH CHDWHTGLLP VFLKDHFSQK KFYHHMKTIL TIHNLKFQGV FPENILEDIL
GLDYIYFKPD GVEFFGQVNF LKGGLIFSDI ITTVSNNYAE EITTPEYGEQ LHGVLKSRSK
ELFGIMNGLD YEEYNPETDP YLYQNFSLKN PVRKIKNKLK LQQELGLPVD KNTPVISVIS
RLYKQKGIDL LVQALPHILS RNIQFILLGT GDKNYELFFK EARFAYGTNL SVNIKFDNEL
ARKIYAGSDI FLMPSLFEPC GLGQLIAMRY GTIPIVRKTG GLKDSVKPFD PDSGTGNGFL
FDEFNSKSML KAIDEALTIY KNKNLWNTIR ENNLKTDFSW KQSALKYQKL YKKLINVN