Gene Hore_06840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_06840 
Symbol 
ID7312919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp740906 
End bp742084 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content41% 
IMG OID643611115 
Productconserved hypothetical protein TIGR00375 
Protein accessionYP_002508436 
Protein GI220931528 
COG category[S] Function unknown 
COG ID[COG1379] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00375] conserved hypothetical protein TIGR00375 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGGAAA TATATGCAGA TCTTCATATA CACATTGGCA GTGCCTGTGG GGGGCAGCCC 
GTAAAGGTGA CTGCTTCCAG GAAACTTAAC TTTCAAAACA TCCTACAGGA GTCGTTGTAC
AGGAAGGGAT TAAACCTTGT CGGGATTATA GATTCTGCTT CACCACTGGT AATAAATGAT
ATAGAAGATC TCCTTGATAA AGGTATTATG GAAGAACTAC CTGAAGGGGG GGTAAAATAT
CAGGATAAGC TTTTTATTAT CCTCGGTTCG GAAATTGAAA GCCGGGAAGA GAATGGGGGT
CAGGCACACT ATTTAGCTTA TTTCCCATTT TTAAGCCAGA TAAAAGAATT TAGTCAATTA
TTGGGGAATT ATATTACAAA TATAAATCTC AGTTCCCAGG CTTGTCGTCT AACTGGCAGG
GAGATTTTAA ATATTGTTGA TGAACTTGGA GGCCTTTTAA TTCCTGCACA TGCTTTTACG
CCCCACAAAA GTTTTTATGG GAGGTGTTTT TCCGGCTACC GTGAAGTTTT TTCTGATGAA
GAGTGGGAGA AGATTCCTGC TATTGAACTG GGGTTAAGTG CCGATACTCA TCTGGCAGAT
TTTCTTTCAG AACTGGCGGG GAAATCTTTT CTAAGTAATT CCGACGCCCA TTCTCTTGGG
AAAATAGCCC GTGAATATAA TAAAATGAGA CTTGAGGATA TTAATTTTAA GGAATTCAAA
CTGGCATTAC AGAGAAAAAA AGGCCGGTGT ATAACATATA ACTATGGCCT TGATCCCAGA
CTGGGTAAAT ACTATTCATC ATATTGCCTT CACTGCCAAA AAACAGTACC ACTTACCGGA
GGAGAAAGAT GTTCACTCTG TGGGAGCCAG AAGATAATTA TGGGGGTAAA AGATCGTATT
ATAAATATAA GTAAACGAAA TAAATCAATA TCCCCTCCCT GGCGCCCCCC CTATGTACAT
CAAATCCCCC TGGCCGATGT ACCAGGGGTT GGCAAAAAGA CCCTCAATAA ATTATTAAAA
TCCTTTGGGA CAGAAATGGA GATTATTCAT CAGTCTGGGG TAAATGAATT GTCAGAACTT
GTCGGAACCA GGATTGCAGG GAATATTGAT AAGGCACGTT CTGGTAAGGC TTCTATAGAG
CCCGGTGGAG GTGGTGTTTA TGGCAAAGTT ATGGGTTAA
 
Protein sequence
MQEIYADLHI HIGSACGGQP VKVTASRKLN FQNILQESLY RKGLNLVGII DSASPLVIND 
IEDLLDKGIM EELPEGGVKY QDKLFIILGS EIESREENGG QAHYLAYFPF LSQIKEFSQL
LGNYITNINL SSQACRLTGR EILNIVDELG GLLIPAHAFT PHKSFYGRCF SGYREVFSDE
EWEKIPAIEL GLSADTHLAD FLSELAGKSF LSNSDAHSLG KIAREYNKMR LEDINFKEFK
LALQRKKGRC ITYNYGLDPR LGKYYSSYCL HCQKTVPLTG GERCSLCGSQ KIIMGVKDRI
INISKRNKSI SPPWRPPYVH QIPLADVPGV GKKTLNKLLK SFGTEMEIIH QSGVNELSEL
VGTRIAGNID KARSGKASIE PGGGGVYGKV MG