| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_06720 |
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| Symbol | |
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| ID | 7312907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 728887 |
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| End bp | 730632 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643611103 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002508424 |
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| Protein GI | 220931516 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAA AGGTTAATTT TAAACAATTA AGTGAATTAA ACCGGAAGAC AGATGTTATA
TTAAATTCAA CTCATGATGG CCTTATATCT ATTGGAAAAG ATTATAAAGT TGAGCTCTTT
AATAGAGCAG CTGAAAAAAT ACTGGGTATT AAAAAAGATA GAGTTCTTGG CAAAGATGTA
AGAGAAGTAA TTCCTAACAC AAGGCTTCAT ATTGTTCTTA ATAAGGGTGA GGCGGAACTA
AATAAAATTC AACATGCCGG TGATATTACT ATTATTACTA ACCGGGTTCC TGTATATGAT
GAACAGGGAA ATATAATTGG GGCGGTAGCT GTTTTCAGGG ATATTACTGA AGTCAAAAAA
CTGGCAGAAG AAATTACCAA TTTGAAAGAG ATGAGGACCC TACTGGAAGC TATAATAAAT
GCTACTCAGG ATGCTATTTC AGTAGTTGAT GAAAAAGGAA TAGGAATATT GATTAATCCA
GCCTATACCC GTTTGACCGG TTTGACAGAG GAAGATGTTA TTGGTAAACC GGCTACTGTG
GATATAGCTG AAGGGGAGAG TATGCACTAC CGTGTTTTAA AGACCAAAAA ACCGGTAAAA
GGGGTAAAGA TGAAAGTTGG TCCATCAAAG AAAGAAGTCA TTGTCGATGT GGCCCCCATC
ATAGTTGATG GGAAATTAAA GGGAAGTGTT GGAGTTATCC ATGATGTTTC TAAAATTAAA
CGTTTAACTG AAGAACTGGA TCATGTCAGG AGAATTATCA GGCATTTAAA TGCTAAATAC
ACCTTTGAAG ATATCATTGG AGAAAGTGAA ACCATGAAGG CTGCCAAAAA CCAGGCCAGG
AAAGCCTCAA AAACACCGGT TACTGTCTTA TTAAGGGGGG AAAGTGGTAC TGGAAAGGAA
CTTTTTGCTC ATGCTATTCA TAATGCCAGT CCCCGCCAGA ATAATAAATT TATCCGGGTT
AACTGTTCAG CGATTGCTGA TAATATCCTG GAAAGTGAAT TATTTGGTTA TGAAGAGGGG
GCCTTTACCG GTGCCAGAAA GGGTGGTAAA AAGGGGTATT TTGAGGAAGC AGACGGAGGC
ACTGTTTTCC TGGATGAGAT TGGAAAAATC AGTCTGGACC TCCAGGCTAA ACTATTACGG
GTCTTACAGG AACGGGAAAT TGTAAGGGTT GGTGGGACCA GGCCCAGAAA TGTTGATGTT
CGTGTTATAG TAGCGACAAA TACCAATCTG GAGCGGGCCA TTCAGGAAGG AAACTTCAGA
GAAGATTTAT ATTATCGTCT TAATGTTTTC CCTCTTCATA TTCCACCCCT AAGGGAAAGA
AAAGAGGATA TACCGTTGCT GGTTCACCAT ATGATTAGAA AATTTAATCA GGAATATGGT
CGTTCGGTTA AGGGTTGTAG TGAAGATGCC CTTCAGAAAT TAAGGGAATA CCACTGGCCC
GGTAATGTGA GAGAGCTGGA AAATTTAATA GGTCGGGCCA TGATAAATAT GGGAATAGAA
GAAGAGGTTA TCAGGTTAAA GCATCTCCCA TTTTTTGACG GACCGGGGAA TAAAAAAACC
CGTGAAAATA AAGATGAATT GAATGTTGAA GATCGTTCAT TGAAAGAAAT AGTGGAATCA
ACCGAGAAAA AAGCTATTAT AGAAGCCTTG AATAAAACTG ATGGGAACAG GACAGAGGCT
GCTAAATTAC TCGGGATAGC AATTAGAAGC CTTTATTATA AGCTTGATAA ATACGGGATT
GACTGA
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| Protein sequence | MSEKVNFKQL SELNRKTDVI LNSTHDGLIS IGKDYKVELF NRAAEKILGI KKDRVLGKDV
REVIPNTRLH IVLNKGEAEL NKIQHAGDIT IITNRVPVYD EQGNIIGAVA VFRDITEVKK
LAEEITNLKE MRTLLEAIIN ATQDAISVVD EKGIGILINP AYTRLTGLTE EDVIGKPATV
DIAEGESMHY RVLKTKKPVK GVKMKVGPSK KEVIVDVAPI IVDGKLKGSV GVIHDVSKIK
RLTEELDHVR RIIRHLNAKY TFEDIIGESE TMKAAKNQAR KASKTPVTVL LRGESGTGKE
LFAHAIHNAS PRQNNKFIRV NCSAIADNIL ESELFGYEEG AFTGARKGGK KGYFEEADGG
TVFLDEIGKI SLDLQAKLLR VLQEREIVRV GGTRPRNVDV RVIVATNTNL ERAIQEGNFR
EDLYYRLNVF PLHIPPLRER KEDIPLLVHH MIRKFNQEYG RSVKGCSEDA LQKLREYHWP
GNVRELENLI GRAMINMGIE EEVIRLKHLP FFDGPGNKKT RENKDELNVE DRSLKEIVES
TEKKAIIEAL NKTDGNRTEA AKLLGIAIRS LYYKLDKYGI D
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