Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_06720 |
Symbol | |
ID | 7312907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 728887 |
End bp | 730632 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643611103 |
Product | sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_002508424 |
Protein GI | 220931516 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAA AGGTTAATTT TAAACAATTA AGTGAATTAA ACCGGAAGAC AGATGTTATA TTAAATTCAA CTCATGATGG CCTTATATCT ATTGGAAAAG ATTATAAAGT TGAGCTCTTT AATAGAGCAG CTGAAAAAAT ACTGGGTATT AAAAAAGATA GAGTTCTTGG CAAAGATGTA AGAGAAGTAA TTCCTAACAC AAGGCTTCAT ATTGTTCTTA ATAAGGGTGA GGCGGAACTA AATAAAATTC AACATGCCGG TGATATTACT ATTATTACTA ACCGGGTTCC TGTATATGAT GAACAGGGAA ATATAATTGG GGCGGTAGCT GTTTTCAGGG ATATTACTGA AGTCAAAAAA CTGGCAGAAG AAATTACCAA TTTGAAAGAG ATGAGGACCC TACTGGAAGC TATAATAAAT GCTACTCAGG ATGCTATTTC AGTAGTTGAT GAAAAAGGAA TAGGAATATT GATTAATCCA GCCTATACCC GTTTGACCGG TTTGACAGAG GAAGATGTTA TTGGTAAACC GGCTACTGTG GATATAGCTG AAGGGGAGAG TATGCACTAC CGTGTTTTAA AGACCAAAAA ACCGGTAAAA GGGGTAAAGA TGAAAGTTGG TCCATCAAAG AAAGAAGTCA TTGTCGATGT GGCCCCCATC ATAGTTGATG GGAAATTAAA GGGAAGTGTT GGAGTTATCC ATGATGTTTC TAAAATTAAA CGTTTAACTG AAGAACTGGA TCATGTCAGG AGAATTATCA GGCATTTAAA TGCTAAATAC ACCTTTGAAG ATATCATTGG AGAAAGTGAA ACCATGAAGG CTGCCAAAAA CCAGGCCAGG AAAGCCTCAA AAACACCGGT TACTGTCTTA TTAAGGGGGG AAAGTGGTAC TGGAAAGGAA CTTTTTGCTC ATGCTATTCA TAATGCCAGT CCCCGCCAGA ATAATAAATT TATCCGGGTT AACTGTTCAG CGATTGCTGA TAATATCCTG GAAAGTGAAT TATTTGGTTA TGAAGAGGGG GCCTTTACCG GTGCCAGAAA GGGTGGTAAA AAGGGGTATT TTGAGGAAGC AGACGGAGGC ACTGTTTTCC TGGATGAGAT TGGAAAAATC AGTCTGGACC TCCAGGCTAA ACTATTACGG GTCTTACAGG AACGGGAAAT TGTAAGGGTT GGTGGGACCA GGCCCAGAAA TGTTGATGTT CGTGTTATAG TAGCGACAAA TACCAATCTG GAGCGGGCCA TTCAGGAAGG AAACTTCAGA GAAGATTTAT ATTATCGTCT TAATGTTTTC CCTCTTCATA TTCCACCCCT AAGGGAAAGA AAAGAGGATA TACCGTTGCT GGTTCACCAT ATGATTAGAA AATTTAATCA GGAATATGGT CGTTCGGTTA AGGGTTGTAG TGAAGATGCC CTTCAGAAAT TAAGGGAATA CCACTGGCCC GGTAATGTGA GAGAGCTGGA AAATTTAATA GGTCGGGCCA TGATAAATAT GGGAATAGAA GAAGAGGTTA TCAGGTTAAA GCATCTCCCA TTTTTTGACG GACCGGGGAA TAAAAAAACC CGTGAAAATA AAGATGAATT GAATGTTGAA GATCGTTCAT TGAAAGAAAT AGTGGAATCA ACCGAGAAAA AAGCTATTAT AGAAGCCTTG AATAAAACTG ATGGGAACAG GACAGAGGCT GCTAAATTAC TCGGGATAGC AATTAGAAGC CTTTATTATA AGCTTGATAA ATACGGGATT GACTGA
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Protein sequence | MSEKVNFKQL SELNRKTDVI LNSTHDGLIS IGKDYKVELF NRAAEKILGI KKDRVLGKDV REVIPNTRLH IVLNKGEAEL NKIQHAGDIT IITNRVPVYD EQGNIIGAVA VFRDITEVKK LAEEITNLKE MRTLLEAIIN ATQDAISVVD EKGIGILINP AYTRLTGLTE EDVIGKPATV DIAEGESMHY RVLKTKKPVK GVKMKVGPSK KEVIVDVAPI IVDGKLKGSV GVIHDVSKIK RLTEELDHVR RIIRHLNAKY TFEDIIGESE TMKAAKNQAR KASKTPVTVL LRGESGTGKE LFAHAIHNAS PRQNNKFIRV NCSAIADNIL ESELFGYEEG AFTGARKGGK KGYFEEADGG TVFLDEIGKI SLDLQAKLLR VLQEREIVRV GGTRPRNVDV RVIVATNTNL ERAIQEGNFR EDLYYRLNVF PLHIPPLRER KEDIPLLVHH MIRKFNQEYG RSVKGCSEDA LQKLREYHWP GNVRELENLI GRAMINMGIE EEVIRLKHLP FFDGPGNKKT RENKDELNVE DRSLKEIVES TEKKAIIEAL NKTDGNRTEA AKLLGIAIRS LYYKLDKYGI D
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