Gene Hore_06590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_06590 
Symbol 
ID7314565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp715163 
End bp715951 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content40% 
IMG OID643611090 
Productresponse regulator receiver protein 
Protein accessionYP_002508411 
Protein GI220931503 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR02875] sporulation transcription factor Spo0A 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000232495 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAGATA ATGTTAGAAT TCTGCTAGTT GATGATAACA AAGAATTCTG TCAGCTACTC 
GAAGAATACC TTGAAGAGCA GGAAAAATTT GAAGTGGTTG GTACAGCTCA TAATGGAGTT
GATGCTTTAG AACTCCTGAA GAGCAAAGAA CCAGATGTTC TTGTGCTTGA TTTAATCATG
CCACATCTGG ATGGGATTGG AGTAATGGAA GAAATGAACA GGTCACGGAT AGGTGGAGAT
GTTAAGACCA TTATCTTAAC CACTTTTGGT CAGGAAGAAG TAACCCAGCG GGTAGTAGAA
TTAGGGGCAA ACTATTACAT AATGAAGCCC TTTGACCTTG ATAAGCTAGT GGAACGAATT
AATCAACTTA TGACCCCTCC TTCTGGCTCA AGTGGAGGTT ATGCCATATC CCAGAATAAT
TCCAGGAATA GTGGGGTCGA TTTAAATGTA AGGATTACTG AAATATTACA TCAGCTCGGG
GTTCCAGCCC ATATAAAAGG ATATCTTTAT TTAAGAGAGG CTATTGAACT TGTTATTAAA
AATGTAGAAT TGCTGGGAGC GGTTACAAAA GAGTTATATC CAAGTGTTGC TGAGAGATAT
AATACGACTC CCAGTCGAGT GGAACGTGCC ATACGTCATG CTATTGAAGT ATGCTGGGAC
AGGGGTAATG TTTCTGTTTT AAATAAGTAT TTCGGGAGTA CAGTTTCTTC AAATAGTGGT
AAGCCAACCA ACTCCCAGTT TATAGCCAAA ATCGCTGATA AACTCCGCCT TGAAATAATG
GCCAGTTAA
 
Protein sequence
MEDNVRILLV DDNKEFCQLL EEYLEEQEKF EVVGTAHNGV DALELLKSKE PDVLVLDLIM 
PHLDGIGVME EMNRSRIGGD VKTIILTTFG QEEVTQRVVE LGANYYIMKP FDLDKLVERI
NQLMTPPSGS SGGYAISQNN SRNSGVDLNV RITEILHQLG VPAHIKGYLY LREAIELVIK
NVELLGAVTK ELYPSVAERY NTTPSRVERA IRHAIEVCWD RGNVSVLNKY FGSTVSSNSG
KPTNSQFIAK IADKLRLEIM AS