Gene Hore_06570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_06570 
Symbol 
ID7314563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp711870 
End bp713567 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content36% 
IMG OID643611088 
ProductDNA repair protein RecN 
Protein accessionYP_002508409 
Protein GI220931501 
COG category[L] Replication, recombination and repair 
COG ID[COG0497] ATPase involved in DNA repair 
TIGRFAM ID[TIGR00634] DNA repair protein RecN 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000129264 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTAG AGTTTCGGGT TAAAAATTTT ATTCTTATTG ATAGACTTGA ACTGGAATTT 
GGTAGGGGAT TAAATGTCCT GACCGGGGAA ACCGGAGCCG GTAAATCTAT GATTATCGGT
GCCCTTGAAG TTCTACTCGG GGCCCGGGCT ACCAGTGATT TAATACGTCG GGGACAGGAC
CGGGCTATTA TTGAAGCTGT CTTTGAGCCA GATAATATGG GTGAAGTTAA CAACTTTCTA
AAAGAATCGG GTTTTGAAAT TGAGCCTTCT TATTTGATTA TATCAAGAGA GATTAACCGA
AATGGCCGTA ATCGAAACCG GATAAATGGT CAGCTGGCTA CTGCAGGAAT GGTCAAAAAA
CTTGGGGGAT TTCTAATTGA TATTCACGGC CAACATGAAC ACCAGTCCCT GCTGGACAGG
AAACTTCATA TCGATATTCT CGATGGTTTT ATTGATCAAA AAGGTATTGA ACTTAAACGT
AATATAAATA AATTGTATAA CAAAATAAAG GACATAGATA CCAGGTTAAA AGATATGAAA
ATTGATGATG CGGAAAAAGC ACGGGAAATC GACCTTCTTG AGTTTCAAAT TAATGAAATT
GAAGAAGCCG GACTCAAAAA AAATGAAATA GAAGAACTAT ATAACGAATA CCGGGTTTTA
AATAACATGG AAGAAATTTT TACTAAAACC GGAACAATAT ATAATGAGCT TTCCGGTGAT
GAATATAATA CGGGGCTTCT GGACAGGTTA GGAAATTATA TGAAAGACCT GGAATCATTA
GAGAAGTTTG ATAATGATTT AAAAAATATT CTGGAGAGTT TCAGGGATGT CTTTTATCAG
TTAGAAGATG TAACTTTTCG AATTCGTGAT TACCATGAGA ATCTTGAATT TAATCAGAAT
AGACTGGATA CAATAGAAGA AAGAATAGAT TTAATAAACC ATCTCCAGAG AAAATATGGA
GAAACAGTAG AAGAAATTCT GGACTATAAA GACAGGATGA AGAATAAGCT AGATACCTTA
AAGAAACAGG ATAAGCTTAT TGAAAAATTG AAACATGAGA AAGAAGAATT AAAACAAAAA
TACTATAAAA TCTCCAGGGA ATTATCTAAA ATAAGGAAAA AACAGGCAAA TAATATTCAA
AAAAAGATTG AAAGTGAACT GTCTGACCTC GCCATGAAAG ACGCCATTTT TAAAGTTAGT
TTTGAGGAAT GTGAACCCCG GAAAAATGGT ATTGACGATA TTGAATTTTT AATAGCGACA
AATCCTGGTT CAGAATTAAA ACCCCTTTCC AGGATTGCTT CCGGAGGAGA ATTATCCAGG
ATAATGCTTG CCCTCAAGAC TATTATGGCT GATATTGACC AGGTTTATAC TCTGGTTTTT
GATGAGGTAG ATAGTGGGGT TGGAGGAAAA ACAGCCCAGA TGATGGCTGA AAAGCTGGCT
CGAATCAGTA AAAACAGACA GGTATTATGT ATAACACATC TACCACAGAT AGCCAGTATG
GCCGACAATC ATTACTTTAT TACCAAAGAA GTTATTGATA ATAATACCTT TACCAGGGTT
CTTCAGCTTG ATTACGAAGG AAGGAGAAAA GAACTGGCCA GAATGCTCGG TGGTGTTGAA
ACAACAGAAA CTACCATAAA ACATGCCGAT GAAATGTTAA ATATGGCCAG GCAAAAGAAA
GATAAATTGA GTGGATAA
 
Protein sequence
MLVEFRVKNF ILIDRLELEF GRGLNVLTGE TGAGKSMIIG ALEVLLGARA TSDLIRRGQD 
RAIIEAVFEP DNMGEVNNFL KESGFEIEPS YLIISREINR NGRNRNRING QLATAGMVKK
LGGFLIDIHG QHEHQSLLDR KLHIDILDGF IDQKGIELKR NINKLYNKIK DIDTRLKDMK
IDDAEKAREI DLLEFQINEI EEAGLKKNEI EELYNEYRVL NNMEEIFTKT GTIYNELSGD
EYNTGLLDRL GNYMKDLESL EKFDNDLKNI LESFRDVFYQ LEDVTFRIRD YHENLEFNQN
RLDTIEERID LINHLQRKYG ETVEEILDYK DRMKNKLDTL KKQDKLIEKL KHEKEELKQK
YYKISRELSK IRKKQANNIQ KKIESELSDL AMKDAIFKVS FEECEPRKNG IDDIEFLIAT
NPGSELKPLS RIASGGELSR IMLALKTIMA DIDQVYTLVF DEVDSGVGGK TAQMMAEKLA
RISKNRQVLC ITHLPQIASM ADNHYFITKE VIDNNTFTRV LQLDYEGRRK ELARMLGGVE
TTETTIKHAD EMLNMARQKK DKLSG