Gene Hore_06490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_06490 
Symbol 
ID7314555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp703919 
End bp705136 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content40% 
IMG OID643611080 
Productexodeoxyribonuclease VII, large subunit 
Protein accessionYP_002508401 
Protein GI220931493 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000332629 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTCTA AAATATACAC TGTATCTGAA GTTACCGGTC GAATAACAGA ATTATTAACT 
TCGGATTCTG TTTTAAATGA CCTCTGGATA ACCGGGGAAA TATCAAATTT CCATCATCAC
AACTCCGGAC ATATGTATTT TACAATAAAG GATGAAAGGT CCTGTATTAA ATCAATTATG
TTCAGGGGGT ATAACCGTAA GCTTAAATTT GAGCCAGAAG ACGGGTTGAA GGTTAACGCC
CATGGCTATG TCGGTGTCTA CAAACCCCGT GGTGATTACC AGTTTTATGT AGACCATCTC
GAGCCTGCCG GAAAAGGAGC CCTTTACCTT GCTTTTGAGC AGTTAAAGGA AAAACTTGAA
AAAGAAGGTT TATTTAACGA AGATCATAAA AAAGAAATTC CCCTGTTGCC GCGAAAAATA
GGGGTTGTTA CTTCGCCAAC CGGGGCAGCT ATCAGGGATA TATTATCAGT GGTTAAACGG
AGATTTAAAA ATGTTTCGGT TTTAATAGTG CCTTCTCTGG TTCAGGGTAA AAAGGCAGCC
AGGGAAATTG TTGAGGGAAT AGAATACCTT AATTCACGGG ATGATATTGA TGTTATTATT
GTAAGCCGTG GTGGTGGGTC TATTGAGGAA CTCTGGTCTT TTAATGAAGA AGTTGTTGCC
AGGGCTATAT ATAATTCCAG GATTCCGGTA ATAAGTGGAG TCGGACATGA AACAGATTTT
ACTATAGCCG ATTTTGTGGC TGATCTCAGA GCACCTACTC CATCTGCTGC TGCAGAGCTG
GCTATATCTA ACCGGATTGA ACTGGAAAAA CACCTTGTCA ATCTTTATAC CAGATTATAT
AATTCGGTCA GTTATCAAAT AAAAAGTTAC CGGGATAGAT TGAATTCACT CTCTTTAAAA
AAAGTTCTGA CCAGGCCAGA AGAATTATTT ATTCAAAAAA TACAATATGT TGATGAATTA
TCAAGACGGC TGGATTGGGC CATGGAAGGC CGGTTGAAAG ATGCCCGTGA AAAATTCAGG
GTTTTAAGTG GTAAGCTGGA TAGTCTCAGC CCCCTGAAGA CTATTGAGAG GGGATATAGT
ATAACCCTGA AGGGGAGTGA ACCCATTAAT AGTATCACTC AGGTTGATAT AGGTGATGTA
ATCAGGAGTC GCCTTAGTGA TGGAATTATA TTGAGTCAGG TAAAGAGGAC CATGAAAGAA
GGTGAACAGG ATGGCTGA
 
Protein sequence
MESKIYTVSE VTGRITELLT SDSVLNDLWI TGEISNFHHH NSGHMYFTIK DERSCIKSIM 
FRGYNRKLKF EPEDGLKVNA HGYVGVYKPR GDYQFYVDHL EPAGKGALYL AFEQLKEKLE
KEGLFNEDHK KEIPLLPRKI GVVTSPTGAA IRDILSVVKR RFKNVSVLIV PSLVQGKKAA
REIVEGIEYL NSRDDIDVII VSRGGGSIEE LWSFNEEVVA RAIYNSRIPV ISGVGHETDF
TIADFVADLR APTPSAAAEL AISNRIELEK HLVNLYTRLY NSVSYQIKSY RDRLNSLSLK
KVLTRPEELF IQKIQYVDEL SRRLDWAMEG RLKDAREKFR VLSGKLDSLS PLKTIERGYS
ITLKGSEPIN SITQVDIGDV IRSRLSDGII LSQVKRTMKE GEQDG