Gene Hore_06380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_06380 
Symbol 
ID7314543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp687497 
End bp690403 
Gene Length2907 bp 
Protein Length968 aa 
Translation table11 
GC content35% 
IMG OID643611068 
Producthypothetical protein 
Protein accessionYP_002508390 
Protein GI220931482 
COG category[S] Function unknown 
COG ID[COG4717] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGATTA AGAGTCTTTA TATAAAGGAT TTTGGTATCT TCCGGGAGCA GAAGCTGGAA 
AAGATAGCTC CAGGTATGGT TGTGATTGGT GGCCCCAATA GAGCTGGAAA AACTACTTTT
CTTAATATAA TTAGGTATCT CTGGTTTGGT TTTCCATCTA AAAAAACTCT ACCGCCTGCC
CTGAGGAAGT ATGAAGTGGA GGCAGATATT GCCCTTGACA ACGAAGATGA ATATAACATC
TATGTAGAAG GACAGGCTCC TCCGAAAATT ACAGCTATTA GGGCAAACTC AGACCAGATA
AAAAGTTTTG AAGAACTGGT CGGGGTAGAT GAGTTTACAT ACCATCGTTT GTTTACCATA
CCCCTGAATG AGCTAAATAA AATCCCCTCA GGGGTTGAAG ATGAAGAAAG GATTCAGTCC
CTTCTGCTGG GGGCAGGACT TAAAGAAATT TTATTAATTC CCAGGATTAA AGATGAACTA
TATAAAAAGG CCTATAATAT AGGGAGAAAA CACGGCAACC CAAGATATGG CCAGTTTAAA
CCCTATTTTG ATAGAATTAA AGAAGGTATA AAAAATAGAC AAAAGGCCCT GTCACAGGTC
CGGGAGTATG AAAAAATTAA GGATAAATTA TCTAAGGTTA ACTTTGAAAT TAATGAACTG
GAAAATTCAA CAATTCCTGA CCTGGAACAT AGATTGACAC TTCTGGATGT ACTTCACAAC
AATTATCAGG ATTTCCAGCA ACTTAATAAA TTAAAAATCA GTTTAAACCG ACCAGAGATA
AAGGACCTTT TATTAAATTT TCCTGTTGAA CTTGTGGAAA GGGTAAAGGG GCTTAAAGAT
AAGTATTTAA ATTTGAAGGA AAATTATAAT AATCTAAAAA CAGAATTTAA AATTGAGACC
GGGGTTCAGG ATGTTAAAAA CAATATTGAA AAATTACTGG ACCATGATGA CAGGATTAAA
ACCATGTTCC AAAAATTATC GGGTCTCAGG GAAAAAGTTA AACAATATAA AAAACAAAAA
GAGAATTTAA CGCGGAACAG GAATGAATTA TTTATTGAAA TGGAACAAAT AAATTCAGCC
TGGCAAAGCT TTAAAGATCT TAAGGAAATT AAAACTGATG CAATTGAACA AAAGGATCTT
GAAGATTGTC TTATCAACTA TACAGAATTG AGTAATACCA GGAATAATTA TTTAAAAGAG
ATAAATGAAC TGGAAGATGA AAAGGCCAGA CTGGAGGAAC AATTAAAGAG TATATCAGAA
AAACATGTGG TTATTAATCT TGGGAAATAT TTTATTCTGG CCCTTATTAT TACTATATCA
GGGGCTGGTC TTTCTATTAT AAATCCTGTT ATGGGGATAA TTATTGGGAC AGGTGGTGTC
TCTGTACTTG CATTGTACTG GTGGTATAAA GGATTTTTAA CCCGGGTAAG TTATGAAAGA
AAGGAAGATT TAAACCAACG TCTGAAAGAC ATCAATGGGA AGCTAAATTA TAAAAACAGT
GAATTTAATA AAATTCAGGA CAGGCTTTCT TCTGTAATTA ATAAATTTCA TGGGTATAGC
CAAAAGCTGG GCCTTAAAGA AGAATCCCCT CCTGAACTTG TAAGGTTGTA TTTTGATAAG
GTTCAGGGAT TAAAGAAAAA AATTAAAGGG TGGCAACAGA GGATTGAAGA TAATGAAAAA
TATGCCCGGG AACTTGATGA ACGGTTATTT GAAATTATTA AGTTGCTAAC TTCTTTTCCA
GACATATCAG GAGGAGAAAT AGTCAATTAT TTTCTTAATT TAAAAAACTA TGATTACAGA
ATAACATACA GTGATAAGTT GTTTTCAGCG GTAGAAGAAT TATATGAATA TCTCCAGTTA
GCCCGGAGGA TTAAGGAGCA AGAAGAAAAA CTTGCCGGGG TTACCCGGGA AATAGTTGAC
CTAATAAAGC CCAATAATCA GGAGAAATTA ATGGAAGAAA TAACTATTTT TTTTAAACGG
GCTGAGGATT ATGAAAAATA TGCAGAAATG AGGTCAGAGG CAAGGCTTCT GGAGGTTAAA
ATAACCGGAA ATTTGAATAC CCGGAGGGTT AGAAACTCTC TGGAATACGC TGCAGTAAAT
AATATACTGG TAAATATAGA TCGAAATTAC ATTAAATCAA ATGATGGCTC CGGATTAATA
AATATACTGG ATAAGTTATA CCGGGATTAT ACTTCGCAAA AAGATATAGA AAAGGATTTT
AGACAGACAG AAACTCGTCT TGAAAAGGTG TCCGGAAAAC TTGAGAATCT CAAAGAAGAA
AGGAAACTTC TACAGGATAA ATTAAAAGAA CTGTCTACTG TTGAAAAGTT ACATAATGCC
CAGGCTCAGA TTGATGAAGG CAGGAACCGG TTGCAATATC TGGCTGAAAA GTATGCTCTC
TATAAGACAG CAACCTATCT TCTTGACCAG GTGCAAAACA GGTTTATTGA AAGGGCCCGG
GAGACCCTGT TGAGTGATGC CAGTAATCTA TTTAATCAGA TAACAGGTGG CGAATATAAA
AAAATATTAC CACCGGATAA TCTACTCAAA ATTGATTTCC AGGCTGTATT AAGTAATGGT
AATACCCAGA AAACAGTTAA TGTTTTAAGC CGGGGAACAA GGGAACAGCT CTATCTGGCT
ATCAGGGTCA GTAGGTTAAG GCAAATAAAG CCACCCCTGC CTGTTATAAT TGACGATTCC
CTTGTAAATT TTGATAGCAG GCATTTAGAA AAAACTATAG AAATATTATC TGACCTCGCC
GAAACCCATC AGGTATTTAT TTTGACCTGC CATCATCGTT TAGTTGATTA CATTGAGAGA
AAGAATCATA AAACCCAGTT CTGGAAATTG GAGAAAGGTG TTTTTAACCC TTCAAGTGGA
GCAGAACTAA AAACAGTGTT AAAGTAG
 
Protein sequence
MRIKSLYIKD FGIFREQKLE KIAPGMVVIG GPNRAGKTTF LNIIRYLWFG FPSKKTLPPA 
LRKYEVEADI ALDNEDEYNI YVEGQAPPKI TAIRANSDQI KSFEELVGVD EFTYHRLFTI
PLNELNKIPS GVEDEERIQS LLLGAGLKEI LLIPRIKDEL YKKAYNIGRK HGNPRYGQFK
PYFDRIKEGI KNRQKALSQV REYEKIKDKL SKVNFEINEL ENSTIPDLEH RLTLLDVLHN
NYQDFQQLNK LKISLNRPEI KDLLLNFPVE LVERVKGLKD KYLNLKENYN NLKTEFKIET
GVQDVKNNIE KLLDHDDRIK TMFQKLSGLR EKVKQYKKQK ENLTRNRNEL FIEMEQINSA
WQSFKDLKEI KTDAIEQKDL EDCLINYTEL SNTRNNYLKE INELEDEKAR LEEQLKSISE
KHVVINLGKY FILALIITIS GAGLSIINPV MGIIIGTGGV SVLALYWWYK GFLTRVSYER
KEDLNQRLKD INGKLNYKNS EFNKIQDRLS SVINKFHGYS QKLGLKEESP PELVRLYFDK
VQGLKKKIKG WQQRIEDNEK YARELDERLF EIIKLLTSFP DISGGEIVNY FLNLKNYDYR
ITYSDKLFSA VEELYEYLQL ARRIKEQEEK LAGVTREIVD LIKPNNQEKL MEEITIFFKR
AEDYEKYAEM RSEARLLEVK ITGNLNTRRV RNSLEYAAVN NILVNIDRNY IKSNDGSGLI
NILDKLYRDY TSQKDIEKDF RQTETRLEKV SGKLENLKEE RKLLQDKLKE LSTVEKLHNA
QAQIDEGRNR LQYLAEKYAL YKTATYLLDQ VQNRFIERAR ETLLSDASNL FNQITGGEYK
KILPPDNLLK IDFQAVLSNG NTQKTVNVLS RGTREQLYLA IRVSRLRQIK PPLPVIIDDS
LVNFDSRHLE KTIEILSDLA ETHQVFILTC HHRLVDYIER KNHKTQFWKL EKGVFNPSSG
AELKTVLK