| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_05980 |
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| Symbol | |
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| ID | 7314503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 650670 |
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| End bp | 651752 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643611028 |
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| Product | Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| Protein accession | YP_002508350 |
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| Protein GI | 220931442 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATTGA TGGATATCAA AGAATTTTTA AAAAAATTTG TAGAAGACCA ACATATTTCT
GATCTTCATC TTACAGTTAA TTCTAAACCT GTAGTCAGAT ATGACGGAAA ACTCAAAGTA
TTTGAAGAAT TTTCGGGTCG GATTGGGTTT GAGGATATGC AGAATATTAC TAAAGAACTA
ATGACAGATG ACCAGTGGCA ACAATTTCAG GAAAAGGGTG AGCTTGATTT TTCCTATAGT
GTTCCCGGTT TTTCCCGGTT CCGGGTTAAT GCTTATTACC AGAGGGGGGC TATTGCCCTG
GCTTTGAGGA TAATCCCGAC AAAAATACCA ACCATCGAAG AGCTGGGTCT ACCGCAAATT
TTAAAAAACC TGGCCCTGAT GAGAAAGGGA CTGTTCCTGT GTACCGGCCC TACTGGAAGC
GGGAAGACAA CAACCCTGGC TTCTATGATT AATATTATCA ATAAAAATAG ACAGGCCCAC
ATCCTGACCC TTGAAGACCC CATAGAATAT TTACACCGCC ATAATAAAAG TATTGTTCAT
CAAAGGGAAG TGGGGATTGA TACTACAAGT TTTAAAGAAG GGTTGAGATC TGCCCTGAGG
CAGGACCCTG ACGTTATTCT GGTTGGGGAG ATGAGGGATC ATGAAACAAT ATCCATTGCC
TTAGAAGCAG CCGAGACCGG TCATCTTGTT CTGGCAACAT TACATACGAA TGATGCTCCC
CAGACCATTG ATCGTATTAT AGATGTTTTT CCTCCCCAAC AGCAACGACA GGTCAGGGTG
CAGTTATCAC TTACTCTTAA CGGGATTGTT TCCCAGCAAT TGCTGCCCCG GAAGGATGGT
AATGGCAGGA TAGCAGCCCT GGAGGTATTA ATTGGAACCC CGGCTGTCAG AAATGTCATC
AGGGATGGAA AGAGTCATCA ACTTTATTCC AGTATGCAGA CCGGTGGGAA ATACGGAATG
ATCACCATGG ACAACTATAT ACTTGATTTA TTAAGTAAAA GTCTTATTAA TAAGGATACT
GCCCTGAGAA GGGCCAATGA CCCGGAATAT ATCAAAAAGA GGATTAATGC GGTCAGGGTT
TAA
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| Protein sequence | MVLMDIKEFL KKFVEDQHIS DLHLTVNSKP VVRYDGKLKV FEEFSGRIGF EDMQNITKEL
MTDDQWQQFQ EKGELDFSYS VPGFSRFRVN AYYQRGAIAL ALRIIPTKIP TIEELGLPQI
LKNLALMRKG LFLCTGPTGS GKTTTLASMI NIINKNRQAH ILTLEDPIEY LHRHNKSIVH
QREVGIDTTS FKEGLRSALR QDPDVILVGE MRDHETISIA LEAAETGHLV LATLHTNDAP
QTIDRIIDVF PPQQQRQVRV QLSLTLNGIV SQQLLPRKDG NGRIAALEVL IGTPAVRNVI
RDGKSHQLYS SMQTGGKYGM ITMDNYILDL LSKSLINKDT ALRRANDPEY IKKRINAVRV
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