| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_05970 |
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| Symbol | |
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| ID | 7314502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 648991 |
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| End bp | 650667 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643611027 |
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| Product | Tfp pilus assembly protein PilB |
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| Protein accession | YP_002508349 |
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| Protein GI | 220931441 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E
[TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGAA CACATATAAA GAAATTAGGA GAATTATTAC TTGATTTCAA TTTTATTACT
GAAAAACAGC TTAATGAGGC CCTTAAAAAA CAGAATAAGT CAGGAAAAAA ACTGGGAGAA
ATCCTGGTTG AATCAGGCTA TCTCAATGAA AATGATTTAA TACAGGTCCT GGAGTTTCAG
CTGGGTATTC CCCATGCTGA CCTGAACAAA TATGTAATCA ACCCTCATCT GGCCCAGTAT
ATACCTGAAA ATATAGCCCG GCGTCATAAT GTTGTTCCCC TTGAAAAGAA AAATGGCAAG
CTTAAGGTTG CCATGGTTGA TCCAACCAAT CTTGTCGCCA TAGAGGATAT TGAAATGACT
TCAGGGTTAA AGGTAGAACC CCTGATTGCT TCCCGGAAGA ATATAAAAAT GGCTTTAAAC
CAGATTTATT CAGTTAATGA TTCAGATGCG GCCGAAGTAT TTGCCAGCTT AAATGAGGTT
ACTACCAAAA CTAATGAAGA ACCTGAATTA AATGAATTAA AAGAAATGAT AGAGGATGCC
CCTATCGTTA GACTGGCCAA TTTAATTATT AATCAGGCTA TCCAGATGAA GGCCAGTGAT
ATTCACATTG AACCCCAGGA GGACCAGGTC AGGGTCAGGT ACAGGGTTGA TGGTGTTTTA
CGGGAAAATA TGACGGTTCC CAAACACAGT CAGGCGGCCC TGATTTCAAG GTTGAAGATA
ATTGCTGACC TTGATATTAC CGAGAGAAGG GTTCCCCAGG ATGGTAGGAT AGAGCTCAAT
GTCAGCGGGG TCAAAATAGA TATGAGGGTT TCAACCCTTC CCACAGTTTA TGGGGAAAAG
GTTGTTATCA GACTTTTAAA TAAAGAAGAG AAACTATTAC AGATTGAACA ACTGGGATTC
AGCGAGACCA ATTTAAGCAG GTTTATGAAA CTTATTAAGC AACCCCACGG AATTATCCTG
GTTACCGGAC CCACCGGAAG TGGTAAATCA ACTACCCTTT TTGCTGCTTT GAATAAACTC
AATACACCTG AAAAGAACAT AATTACTGTT GAGGATCCGG TTGAATACCA GCTTCGTGGT
ATTAATCAGG TTCAGGCCAA TTCCAGGGTT GGGTTAACTT TCGCCAGTGC CTTACGGTCA
ATCTTGAGGC AGGACCCGGA TATCGTAATG GTCGGTGAGA TCAGGGATGA GGAGACGGCT
CGCATAGCGG TCCGGGCTGC CCTGACCGGA CATCTGGTTC TGAGTACCCT CCATACCAAT
GATGCCGTAA GCTCAGTTAC GCGACTTATT GATATGGGCA TTCCACCTTA TCTGGTGGCC
TCATCTGTAA TCGGGGTTGT GGCTCAGAGA CTGGTCCGGA GGTTATGTAC CTGTAAGGAA
GAGTATGTTC CTGGACCAGA AGAAATGGAA TTTCTCCAGG TTAATGATAT TGGAAAATTG
CAACGTCCTG AAGGCTGTAA AAAATGCCAT TCTACAGGCT ACAGGGGTCG TCTTCCGGTC
CATGAAATAT TAATTATGGA TAGGAAATTG AGAGAAATGA TTGTAAATGG AGAGGGGGAA
TCTGTTATAA AGAAATATGC CCGGAAAGCA GGAATGCTAA CTTTAAAAGA AGATGGGGTT
AATAAGGTAA TAGAAGGGTT AACTTCATAT GAAGAACTGG CAAGGGTAGT TAGTTAG
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| Protein sequence | MTRTHIKKLG ELLLDFNFIT EKQLNEALKK QNKSGKKLGE ILVESGYLNE NDLIQVLEFQ
LGIPHADLNK YVINPHLAQY IPENIARRHN VVPLEKKNGK LKVAMVDPTN LVAIEDIEMT
SGLKVEPLIA SRKNIKMALN QIYSVNDSDA AEVFASLNEV TTKTNEEPEL NELKEMIEDA
PIVRLANLII NQAIQMKASD IHIEPQEDQV RVRYRVDGVL RENMTVPKHS QAALISRLKI
IADLDITERR VPQDGRIELN VSGVKIDMRV STLPTVYGEK VVIRLLNKEE KLLQIEQLGF
SETNLSRFMK LIKQPHGIIL VTGPTGSGKS TTLFAALNKL NTPEKNIITV EDPVEYQLRG
INQVQANSRV GLTFASALRS ILRQDPDIVM VGEIRDEETA RIAVRAALTG HLVLSTLHTN
DAVSSVTRLI DMGIPPYLVA SSVIGVVAQR LVRRLCTCKE EYVPGPEEME FLQVNDIGKL
QRPEGCKKCH STGYRGRLPV HEILIMDRKL REMIVNGEGE SVIKKYARKA GMLTLKEDGV
NKVIEGLTSY EELARVVS
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