| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_05960 |
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| Symbol | |
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| ID | 7314501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 647961 |
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| End bp | 648830 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643611026 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_002508348 |
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| Protein GI | 220931440 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATA ATAGTACACA GGTGGTTGGA TTGATGGGAT ACCCCCTGGG TCATTCAATG
TCCCCGGCCA TGCATAACCG GGCCTATAAA GACCTTGGGA TTAATTATGT TTATCTTCCG
CTGGAAATAA AGCCTGACTT TCTCAAAGAA GGGATAGAGG GATTAAGAGC ATTTAATTTC
CGGGGGGTTA ATGTGACCAT ACCCTATAAG GAAAAAGTTA TCCCCTATCT GGATGAAATT
GATAGGCTGG CCGGGGAAAT CGGGGCTGTC AATACAATAG TTAATAATGG TGGAAAATTA
AAGGGTTATA ATACTGACGC CCTGGGCTTT AAAAAAATGC TTGAAGATGA CTGTAGTTTT
GAAATTAAGG GAACAAAAGC GGTAATTATC GGAGCAGGAG GGGCCAGCCG GGCAGTCGGG
GCAGTCCTGG CCAGGGAAGG GGCCAGTGAA ATCTTTCTCT TAAACAGAAC CCTGAAAAAA
GCAGCAAAAC TGGTCGGTAT CTGGAATAAG ACTTATCCCG GTATAAAAAC TGTTGCTCTA
CCTTTAGATG AAGATAAATA TCTACCTGTT GTTAAAAGAT GTGATGTAAT CATTGATACA
ACACCGGTGG GCATGGCTCC TGGTATTAAA GGAGGGCCTG TAATTGCTAA AGAAGCTATA
ACCAGGGATA CTCTTGTAGT CGATCTGGTA TATAATCCAC CTGAAACTAC ATTAATAAAA
GCCGGAAGGC AGGTCGGGGC CAGAACTATG AATGGTTTTC CTATGCTTAT TTATCAGGCG
GCTTATGCAT TTAAACTGTG GACGGGGATA AAACCTGAAC TATTTATAAA ACCGGTCCGG
GAGGCAATTT CACCAGATTT TTTTGCATAA
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| Protein sequence | MFDNSTQVVG LMGYPLGHSM SPAMHNRAYK DLGINYVYLP LEIKPDFLKE GIEGLRAFNF
RGVNVTIPYK EKVIPYLDEI DRLAGEIGAV NTIVNNGGKL KGYNTDALGF KKMLEDDCSF
EIKGTKAVII GAGGASRAVG AVLAREGASE IFLLNRTLKK AAKLVGIWNK TYPGIKTVAL
PLDEDKYLPV VKRCDVIIDT TPVGMAPGIK GGPVIAKEAI TRDTLVVDLV YNPPETTLIK
AGRQVGARTM NGFPMLIYQA AYAFKLWTGI KPELFIKPVR EAISPDFFA
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