| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_05880 |
|---|
| Symbol | |
|---|
| ID | 7314493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 641956 |
|---|
| End bp | 642645 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643611018 |
|---|
| Product | cell wall hydrolase SleB |
|---|
| Protein accession | YP_002508340 |
|---|
| Protein GI | 220931432 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
|---|
| TIGRFAM ID | [TIGR02869] spore cortex-lytic enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1.84059e-17 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAA AAATGGCCAC AGTAATATTA ATCCTGCTGT TTGTTACGGT ATTTATTTTA
GATTTCCATA AAGTTGAGGC CAGTGGCTAT TATATGGAGC TCGGTACCAG GATCCTTAAA
AAAGGTGACG AAGGTCCCGA TGTAGCCATT CTCCAGAGGA AATTAAAAGA GTTAAATCTT
TACAGGGGAA AGATAGATGG TATCTTTGGA CCTGGAACGG AGAAGGCAGT TAAATTGTTT
CAGGAAAAAA ATAAATTAAA AGTAGATGGA ATTGTAGGGC CAGGGACATA CAGTAAACTT
CCCAAAGGTA ATCTACTTAG CAGAATGGAT ATTTCCAGGG ATGATATTTT GCTTCTTGCC
AGGATAATTC ATGGTGAAGC CAGGGGTGAG AGTTTTAAAG GTAAGGTTGC AGTAGGTGCC
GTAATACTTA ACAGGGTAGC TTCCCGAAAA TTTCCGGATA CTATAAGGGA AGTTATTCTT
CAGAAGGGGC AGTTCAGTTG TTTGCTCGAT GGACAGGCCA ATCTCTATCC ATCTGCAGAA
TCTATAGAAG CAGCCAAAGC AGCCCTGCTT GGGTATGATC CTACCTATGG CTCTATGTTT
TTCTATAATC CAGATGTGGC TACAAATACA AGGTGGATTT CAACAAGACC TGTTATGACG
AGAATAGGGG ATCATGTATT TTTAAAATAA
|
|---|
| Protein sequence | MKEKMATVIL ILLFVTVFIL DFHKVEASGY YMELGTRILK KGDEGPDVAI LQRKLKELNL
YRGKIDGIFG PGTEKAVKLF QEKNKLKVDG IVGPGTYSKL PKGNLLSRMD ISRDDILLLA
RIIHGEARGE SFKGKVAVGA VILNRVASRK FPDTIREVIL QKGQFSCLLD GQANLYPSAE
SIEAAKAALL GYDPTYGSMF FYNPDVATNT RWISTRPVMT RIGDHVFLK
|
|---|
| |