Gene Hore_05880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_05880 
Symbol 
ID7314493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp641956 
End bp642645 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content40% 
IMG OID643611018 
Productcell wall hydrolase SleB 
Protein accessionYP_002508340 
Protein GI220931432 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID[TIGR02869] spore cortex-lytic enzyme 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.84059e-17 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA AAATGGCCAC AGTAATATTA ATCCTGCTGT TTGTTACGGT ATTTATTTTA 
GATTTCCATA AAGTTGAGGC CAGTGGCTAT TATATGGAGC TCGGTACCAG GATCCTTAAA
AAAGGTGACG AAGGTCCCGA TGTAGCCATT CTCCAGAGGA AATTAAAAGA GTTAAATCTT
TACAGGGGAA AGATAGATGG TATCTTTGGA CCTGGAACGG AGAAGGCAGT TAAATTGTTT
CAGGAAAAAA ATAAATTAAA AGTAGATGGA ATTGTAGGGC CAGGGACATA CAGTAAACTT
CCCAAAGGTA ATCTACTTAG CAGAATGGAT ATTTCCAGGG ATGATATTTT GCTTCTTGCC
AGGATAATTC ATGGTGAAGC CAGGGGTGAG AGTTTTAAAG GTAAGGTTGC AGTAGGTGCC
GTAATACTTA ACAGGGTAGC TTCCCGAAAA TTTCCGGATA CTATAAGGGA AGTTATTCTT
CAGAAGGGGC AGTTCAGTTG TTTGCTCGAT GGACAGGCCA ATCTCTATCC ATCTGCAGAA
TCTATAGAAG CAGCCAAAGC AGCCCTGCTT GGGTATGATC CTACCTATGG CTCTATGTTT
TTCTATAATC CAGATGTGGC TACAAATACA AGGTGGATTT CAACAAGACC TGTTATGACG
AGAATAGGGG ATCATGTATT TTTAAAATAA
 
Protein sequence
MKEKMATVIL ILLFVTVFIL DFHKVEASGY YMELGTRILK KGDEGPDVAI LQRKLKELNL 
YRGKIDGIFG PGTEKAVKLF QEKNKLKVDG IVGPGTYSKL PKGNLLSRMD ISRDDILLLA
RIIHGEARGE SFKGKVAVGA VILNRVASRK FPDTIREVIL QKGQFSCLLD GQANLYPSAE
SIEAAKAALL GYDPTYGSMF FYNPDVATNT RWISTRPVMT RIGDHVFLK