| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_05860 |
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| Symbol | |
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| ID | 7313558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 640622 |
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| End bp | 641320 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643611016 |
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| Product | sporulation sigma factor SigK |
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| Protein accession | YP_002508338 |
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| Protein GI | 220931430 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02846] RNA polymerase sigma-K factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000000000165586 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTTATCAC TATTAATTAG TTTTTTCAGG GGGTTATTGA TTCTCGTTTC TTATATAAGA
AACGGTAAGG TTTTTCCTCA ACCATTATCC CCGGAAGAAG AAGAAAAATA TATCAAGAGA
ATGAGGCAGG GAGATGAAGA AGCCAGGAAT ATATTGATTG AACATAATTT AAGACTGGTT
GCCCATATTG TAAAAAAGTA TAATTCAGTT TATACAGATA ATGAAGATTT AATTTCTATA
GGAACTATTG GATTAATTAA GGGGATAAAT ACCTATGATG AAACAAAAAA AACCAAACTG
GCAACCTATG CTGCCCGTTG TATAGAAAAT GAAATTCTGA TGCACCTCAG GTCTGTAAAA
AAACTAAGTA ATGAAACCCT CCTTCAGGAA TCAATTGGTT CAGATAAAGA TGGAAATGAT
ATAACCTTAA TGGATGTCCT TGATACCCGG GAAGATTCTG TTATCAACAA AGTTGAAAAA
AGTATTGATG AAGAACAACT CTATAATAAA CTGGGGGAGT TATCACCAAG GGAGAAAAAG
GTACTGGAAT TACGATATGG ATTGCTTGAT GGAAAAAGAT TGACCCAGAA AGAGGTAGCC
TCTATTCTGG GAATTTCAAG GTCTTATGTT TCCAGGATAG AAAAAAAGGC TATTCAGGAA
TTAAGTGATC TTTTCCACGG TAAGGCTGGT CACAGGTAG
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| Protein sequence | MLSLLISFFR GLLILVSYIR NGKVFPQPLS PEEEEKYIKR MRQGDEEARN ILIEHNLRLV
AHIVKKYNSV YTDNEDLISI GTIGLIKGIN TYDETKKTKL ATYAARCIEN EILMHLRSVK
KLSNETLLQE SIGSDKDGND ITLMDVLDTR EDSVINKVEK SIDEEQLYNK LGELSPREKK
VLELRYGLLD GKRLTQKEVA SILGISRSYV SRIEKKAIQE LSDLFHGKAG HR
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