Gene Hore_05820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_05820 
Symbol 
ID7313554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp637468 
End bp638481 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content35% 
IMG OID643611012 
Productaminodeoxychorismate lyase 
Protein accessionYP_002508334 
Protein GI220931426 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0160306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAG CAGCAAGGGT TTTTCTGATT TCTATTATTG TTATAACCGG GTTATTAAAA 
TTTACTTCAT TAATTAGTCC GGTAAACAGA TATGATAATA CTATAATCGG GGTAGAGATT
AAATCCGGGT CTTCAAGCAG GGAAATCAGT CAAAAACTTT ATAATAAGGG TTTAATAAAG
TCTGCCCGAT TATTTAATAT ACTGGTAAGT GTCAGCGGAT TTGATAATAG CTTAAAAGCG
GGTTATTATG AATGGAGCCC AAGTGATAAC CTTATTAGTA TTATTAAAGA CCTTAACAGA
GGCCGGGTAG CTACTTTTAA AATCACTATA CCTGAAGGAT TTACAGTTGA AGAGGTAGCT
GAAAAACTTG GAGAGGTTAC ATTTTACAGT AAAGAAAATT ATCTCAGTCT CGCTGAAGGT
AACAATTTTA ATCGCCCCTA CCTGCCCCGT AAGAGACAGG GTGTTAAATA TGTTCTTGAG
GGGTTTTTAT ATCCTGATAC ATATATAATT CCTAAAGAAT ATAACCCCGG GCAGGTTTTG
AATGTTATGT TAAATAATTT TGAGGAAAAA TGCTGGCAAG AATTAAGAGA AAAGTCCTTG
AAAAAGGGAA TTACTCCTTA CGAGGCTATA ATTATTGCCT CTTTAATAGA AAAAGAGGCC
AGACTGGAAA CAGAGAAACC AATTATTTCA GCCGTTATTT ATAACCGATT ACGAAAAGGT
ATGCTATTGC AGATAGATGC AACGGTTCAA TATAGTCTAC CTGAATGGAA GGACAGGGTT
TTATATAAAG ATTTACGGAT AGATTCTCGC TATAATACCT ATAAATACCC CGGGCTGCCA
CCTGGTCCTA TCTGTAATCC CGGTAAATCA TCTATTGAGG CTGCCTTAAA TCCAGCTGAT
GTTGATTATT TATTTTATTT TGCCCTTGAG GATGGTAGTC ATATTTTTAC AACAACCTAT
GAAGAACATT TAAGACAGCA AAATAAATAC AGACGGGGTC TAGAAAATGA ATGA
 
Protein sequence
MKKAARVFLI SIIVITGLLK FTSLISPVNR YDNTIIGVEI KSGSSSREIS QKLYNKGLIK 
SARLFNILVS VSGFDNSLKA GYYEWSPSDN LISIIKDLNR GRVATFKITI PEGFTVEEVA
EKLGEVTFYS KENYLSLAEG NNFNRPYLPR KRQGVKYVLE GFLYPDTYII PKEYNPGQVL
NVMLNNFEEK CWQELREKSL KKGITPYEAI IIASLIEKEA RLETEKPIIS AVIYNRLRKG
MLLQIDATVQ YSLPEWKDRV LYKDLRIDSR YNTYKYPGLP PGPICNPGKS SIEAALNPAD
VDYLFYFALE DGSHIFTTTY EEHLRQQNKY RRGLENE