| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_05740 |
|---|
| Symbol | |
|---|
| ID | 7313546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 627226 |
|---|
| End bp | 628281 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643611004 |
|---|
| Product | predicted permease |
|---|
| Protein accession | YP_002508326 |
|---|
| Protein GI | 220931418 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0159553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTAAAAC GGTATAAAAA TGAATTAAAA ATAGGAATTA TGCTCCTGGT ACTGGGGGGC
ATAATTTATT TTATACTATT AATAAAAAAA GTTCTTTTAC CTTTTGTCTT TGGTACCTTT
CTCGCCTATT TATTTAACCC TCTAATAACT TTTTTGCGAA AGAGAAATAT TTCACGGATT
ACAGCCCTGT ATATATTAAT ACTTGTGGTC TTAATCTTGT TTATTTCCAT CAGCATATTT
ATATTACCAA TCTTTATAAG GGAACTTGAA GAATTAACTG TTACCCTGCC TAAATATGTT
AATTCTCTCG AAAAGTATGT TGAGTATGTG AACCGGGAAT ACAGGCGGAT ACATCTGCCT
GAAGTAATTA AAGAGGTCAT TGATCAGGCC CTGGCAAAAC TGGAAAATTT CATTCTTAAT
TTTATTGAAA ACCTGACCAC ATCGGTAATA AATTCCCTTA CCTATATTGT AAGTTTGTTT
ATCTCTCCTA TTATTACATA TTATATCCTC AAAGATTATG AAGAGATCCA GTCTTCATTT
TTGAATATTG TTCCCAAAAA GTACCGGAAA CCGGTGTTGA AAAGTGGTCG GGAAATAAGT
AAAATCTTTG TGGGATTTTT AAGGGGCCAG ATCTGGGTCA GTATTATTGT TGGTGTCTTC
AGTACCCTGG GATTGATGTT GTTTAAAGTA AAATTTTATC TATTGCTGGG GATTCTGGCC
GGGATAACCA ATATGATACC ATATTTTGGT CCAGTAATCG GGGCTATCCC GGCGGTAATG
ATAGCTTTTT TATCATCTCC AGTCAAGGCC TTTGGTGTCA TCATCTTATT TTCTTTGATT
CAACAGGTTG AAAGCAGTAT TATTGGACCT AAAATTTTTA GTAACCGGGT TGGCCTTCAT
CCCCTGACGA TTATTTTTGT TCTCCTGGCA GGTGCAGATA TATTTGATGG CTGGGGGCTT
ATTTTTGCTG TTCCTGTTGC CGGTAGTTTA AAAGTTATTT TTAAAATATT TATTGAACAG
ATAATTTCTA TTAAGGGTTT GAGTGGTCAG GAGTAG
|
|---|
| Protein sequence | MLKRYKNELK IGIMLLVLGG IIYFILLIKK VLLPFVFGTF LAYLFNPLIT FLRKRNISRI
TALYILILVV LILFISISIF ILPIFIRELE ELTVTLPKYV NSLEKYVEYV NREYRRIHLP
EVIKEVIDQA LAKLENFILN FIENLTTSVI NSLTYIVSLF ISPIITYYIL KDYEEIQSSF
LNIVPKKYRK PVLKSGREIS KIFVGFLRGQ IWVSIIVGVF STLGLMLFKV KFYLLLGILA
GITNMIPYFG PVIGAIPAVM IAFLSSPVKA FGVIILFSLI QQVESSIIGP KIFSNRVGLH
PLTIIFVLLA GADIFDGWGL IFAVPVAGSL KVIFKIFIEQ IISIKGLSGQ E
|
|---|
| |