Gene Hore_05720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_05720 
Symbol 
ID7313544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp626341 
End bp626826 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content37% 
IMG OID643611002 
ProductPRC-barrel domain protein 
Protein accessionYP_002508324 
Protein GI220931416 
COG category[S] Function unknown 
COG ID[COG3881] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.443895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTATAAAG GAATAGAGAT TATTGGTCTA CCGGTTGTGG AAATAAATAC CGGGCGTGTG 
CTTGGAGAGG TAGAGGATAT AATTTTTAGT GAGTTTGATG GCCTGGTTAA AGGCTTTGTT 
ATAAGAAATA AGAATAAGTA TTTTCTGGAG ACACATAATA TTAATAGAAT TGGAGAAGAT 
GCCATAACTG TTTTGAGTCA AGACCTTTTA AAACCCTGGG AAGAACACAA TACCGTGGAG 
GAAAATGAAC AAACCTTCCA GACACTGAAT AATACCATTT TTGGAGAAAG GGTTATGACA 
ACTTCCGGTA AAGAGGTAGG GAAAGTAAAA GATTTAATTA TTGATGAAAA CAAAAACAGT 
GTTATTGGCT TTGAATTGAC CGAGGGGGTA ATTCAGGATT TATTGGAGGG GCGGAACCTG 
CTGCCACTTT CAAATAACCT TATTTATGGA CAGGATACCT TATTATTAGA TGAAGAGGGG 
GTTTAA
 
Protein sequence
MYKGIEIIGL PVVEINTGRV LGEVEDIIFS EFDGLVKGFV IRNKNKYFLE THNINRIGED 
AITVLSQDLL KPWEEHNTVE ENEQTFQTLN NTIFGERVMT TSGKEVGKVK DLIIDENKNS 
VIGFELTEGV IQDLLEGRNL LPLSNNLIYG QDTLLLDEEG V