Gene Hore_05470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_05470 
Symbol 
ID7313511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp595469 
End bp596728 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content37% 
IMG OID643610969 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002508299 
Protein GI220931391 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000120862 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAGG AAGGAGGTGA ACTTACATTG GAAAACCCCT TTAAAGTATA TCGTGGTTTA 
AATAGAAATA TTTATATTAT TTTTATTGGA CAGGTTATTA ATTCAATGGG AGCGTTTGTT
TTTCCCTTTT TAACCATGTT TCTAACTCAA AAAATAGGCA TGTCCCCTGC TGAAGCAGGT
TCATATGTTA CTGTTGCAGC CCTGGCAAAT GTTCCCGGTA TGTTTCTTGG CGCGAAACTG
GCTGATAGTT TTGGTCGGAA AAGGTTATAT TTAATTTCCT CGACTCTCAT GGCCTTAATG
TTAATTCCAC CTGCTTTTCT GGGTACCAGT AAAGTTGTTA TTTATTTTTT AATAATGATG
TCACTTTTTG CTGGTGCTGT AAATCCTGCA TTTAATGCAA TGGTAACAGA TTTAACCAGG
GGTGAAGAGA GGAAAAAGGC CTTTTCATTA CTTTACCTTG GATGGAATAT GGGTTTTGCT
ATTGGTCCAA TGATTGCTGG GTTTTTATTT AACCACTATT TACCTTTATT ATTTTTAGGG
GATGCAGCAA CTGCCTTTAT TGCTATAGTA CTTATTGGAA TTTATGTACC GGAGACAAAA
GGAATGATTG AAGAAACTCC CGATGAGGAA TTACCGGAAA ACGAGAGGGC AGAAGAAGGG
TCAATTTTTC GTGTTTTGTT AAAACGACCG GGGATAATTC TTGTAAGCTT TATTTTGTTA
TTCTTCCGTC TGGTATATGC CCAGAGTTCT TTTGCCTTAC CAATTCAAAT GAATGAGATT
TTTGGTCAAC AGGGTCCTGC TTATTATGGC ATAAATTATA GCTTTAATGC TATTGTAGTT
GTGGCTTTTA CAGTGCTGGT AACCAGTGTC ACTGTTAAAC TGAAGCCACT GGCCAATATA
ATAATTGCGG GATTATTATT GGCAGTAGGG TTTGGTATGA TTTATTATAT TGATATACTT
CCCTTGTTTT TTCTGTCCAC TTTTGTCTGG ACCATCGGTG AAATCCTGGA GGCAACAAAT
GTCAATGTTT ATATAGCGTC TCATGCTCCT GTAAGCCACC GGGCAAGGTT TAATTCAATT
TTTATGTTTA TTTCAGGAGC AGGGTATGCA TTTGCCCCAA AATTAGGTGG GTTGTTTTTA
GAGTATTATT CAATTAGGGA AATATGGTTA GCTAGTTTTT TTGTAATGGT AATTGCCAGT
AGTGCTCTTT TACTTTTTTA CTTGGGGCAG GAACGGGTTA AAAGATTAAC ATGTAAATAA
 
Protein sequence
MTQEGGELTL ENPFKVYRGL NRNIYIIFIG QVINSMGAFV FPFLTMFLTQ KIGMSPAEAG 
SYVTVAALAN VPGMFLGAKL ADSFGRKRLY LISSTLMALM LIPPAFLGTS KVVIYFLIMM
SLFAGAVNPA FNAMVTDLTR GEERKKAFSL LYLGWNMGFA IGPMIAGFLF NHYLPLLFLG
DAATAFIAIV LIGIYVPETK GMIEETPDEE LPENERAEEG SIFRVLLKRP GIILVSFILL
FFRLVYAQSS FALPIQMNEI FGQQGPAYYG INYSFNAIVV VAFTVLVTSV TVKLKPLANI
IIAGLLLAVG FGMIYYIDIL PLFFLSTFVW TIGEILEATN VNVYIASHAP VSHRARFNSI
FMFISGAGYA FAPKLGGLFL EYYSIREIWL ASFFVMVIAS SALLLFYLGQ ERVKRLTCK