Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_05450 |
Symbol | |
ID | 7313509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 593402 |
End bp | 594292 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643610967 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002508297 |
Protein GI | 220931389 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0434511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAA GACAGCTTAA AATATTTGTC ATGGTTTGCA AAACAAAAAA TATGTCAAAA GCAGCTAAAA AACTATATAT GTCCCAACCC GCTATCAGTC AAACTATCTC AGAACTTGAA GAAGATTTAA ACATAAAACT CTTTGACCGG ATTAAAAAAA GGTTAAAATT AACCTATGCC GGAAAAATCC TTTTACGAAA TAGTAAAAGG ATTTTAAATC TTGTTGATGA AACTGAAAAT ATAATAAAGG ATATAGTCAA TATGAATCAG GGAAAATTAC GTATAGGGGC CAGTATGACT ATTGGTACCT ATCTTTTACC ACAAATAATA GAAGGGTTTT TAAATAAATA TAACAAAATT CACCTACCCT TTACCATTGA CAACACCAAA GTAATTGAAG ATATGATCCT GGATAATAAA CTTGATCTGG CTCTGGTAGA AGGTCCTATT TATTGTAAGG ACATTTTAGT AGAACATTTC TTCGATGATC AACTTTATTT AATGTGTTCG TCAAAACACA GTTGGAGTCA TAAAAGAAAA ATTAATTCAG AAGAACTCAA AGGTGAAGAT TTTATTATAA GGGAAAAAGG CAGTGGTACC AGAGAAACTA TTGAAAATAT AATGAGAAAA CACAGCATAA AATATCATGT TACCCATGTC TTTAACAATA TTGAAGCGAT TAAAAGAGCA ATAATTTCTA ACCTGGGGGT TTCAATCTTA CCCGAAATCT GCGTTAAAGA AGAACTAAAG AAAGGTTTAT TAGTTAAAGT AGATATTCAG GGAATTGAAT TTAAAAGAAA ATTCAGTATC ATCTACCACA AAGATAAATA CCGTTCTCAA CTCTTTAATA ATTTTGTTAA CCATATATAC ACAAATATTT GCAAGTCCTA A
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Protein sequence | MNLRQLKIFV MVCKTKNMSK AAKKLYMSQP AISQTISELE EDLNIKLFDR IKKRLKLTYA GKILLRNSKR ILNLVDETEN IIKDIVNMNQ GKLRIGASMT IGTYLLPQII EGFLNKYNKI HLPFTIDNTK VIEDMILDNK LDLALVEGPI YCKDILVEHF FDDQLYLMCS SKHSWSHKRK INSEELKGED FIIREKGSGT RETIENIMRK HSIKYHVTHV FNNIEAIKRA IISNLGVSIL PEICVKEELK KGLLVKVDIQ GIEFKRKFSI IYHKDKYRSQ LFNNFVNHIY TNICKS
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