Gene Hore_05430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_05430 
Symbol 
ID7313507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp590310 
End bp590939 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content34% 
IMG OID643610965 
Productpredicted membrane protein 
Protein accessionYP_002508295 
Protein GI220931387 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.054004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTTTTT TTGATTTTGT TACCGGTATT ACTATTGGAA CAATTGGTGG GGCCTTTGTA 
ACTACCCAGA TTGAAGGGTT CTATATTTTA CTGAGCCCGG TAATCCTGGC TATTCTGGTT 
GTCCTGACCG GTTACCTGAC CCTGAAAAGT ACACCTGCCA GAAAACTAAT AGAAGGTGAA 
CCCCTTGTCA TAATCCAGAA TGGTAAAATA TATGAAAAAA ACATGAAAAA ATTAAGATAT 
AACCTTGATG ATCTTATGAT GCAATTACGG GAACAGGGGG TCTTTGACCT GAGTGAAGTT 
GAATTTGCAA TCCTTGAAAC TGATGGCAAA CTCAGTGTTT TAAAGAAAAG TCAATACCAA 
CCAGTAAAAC CCAGGGATTT AAATATAAAT ACCAGGTACG TAGGCCTGTC TTCTGAAATA 
ATTAGAGATG GACAAATTGT TGAACAAAAC CTGAAACAAA ACAATCTAAC CCATGAATGG 
TTATATAATG AACTGGCTAA ACAAAATATA AAAAATATAA GAAATATTGT TCTCGCCACT 
CTTTCTACTG ATGGCAACCT ATATATTGAT GTTAAAAATG ATAACCATTC ATATATTCAG 
GAAATAGAAG ATGATGATTC TATGATATAA
 
Protein sequence
MTFFDFVTGI TIGTIGGAFV TTQIEGFYIL LSPVILAILV VLTGYLTLKS TPARKLIEGE 
PLVIIQNGKI YEKNMKKLRY NLDDLMMQLR EQGVFDLSEV EFAILETDGK LSVLKKSQYQ 
PVKPRDLNIN TRYVGLSSEI IRDGQIVEQN LKQNNLTHEW LYNELAKQNI KNIRNIVLAT 
LSTDGNLYID VKNDNHSYIQ EIEDDDSMI