| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_05400 |
|---|
| Symbol | |
|---|
| ID | 7313504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 587030 |
|---|
| End bp | 587233 |
|---|
| Gene Length | 204 bp |
|---|
| Protein Length | 67 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643610963 |
|---|
| Product | putative cold-shock DNA-binding domain protein |
|---|
| Protein accession | YP_002508293 |
|---|
| Protein GI | 220931385 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 4.33246e-16 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTACA CAGGAAAAGT AAAATGGTTT GATGCAAAAA AAGGTTATGG ATTTATCGAA
AGAGAAGATG GAGATGACGT ATTTGTACAT TTTTCCGCTA TTCAGGCTGA TGGATTTAAG
AGCCTTGAAG ATGGAGAAGA AGTAGAATTC GAAATTATCG AAGGTGATCG TGGACCACAG
GCCGCCAATG TTGTTACTTT ATAA
|
|---|
| Protein sequence | MVYTGKVKWF DAKKGYGFIE REDGDDVFVH FSAIQADGFK SLEDGEEVEF EIIEGDRGPQ
AANVVTL
|
|---|
| |