Gene Hore_05370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_05370 
Symbol 
ID7313501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp585501 
End bp586118 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content29% 
IMG OID643610960 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002508290 
Protein GI220931382 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00000000000643211 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAT CAGAGGAAAC CAAAAAAAAA ATATTAAAAA GTGCTATAGA ATTAGTAGCG 
GATAAGGGAT ATGCTTCTAC ATCTACCAGG GAAATAGCTA AAAATGCTGG TGTTTCCGAA 
GCAACCATCT TTAAATATTA TAAAAATAAG GACCAGCTTC TTAAAAAAAT TGTAAGTAAA 
ACTATAAATG ATTTTTTTAA ATACTCGCTA AACAAGTCCC TTCCAGAAGT GTTTGAAGCT 
AACAAAAATA AATCAATAGA TTACTTACTT CAGGAACTTT TAACAGAAAG ATTTCAGTTT 
TTTAAAGAAA ATTCAAAGGC TATTCAGGTT ATTTTTCAGG AAACAATGGT AAATAAGGAA 
GTTAGAGAGT TTTTCAAAAA TAAAGTCTGG ACTAAAATGG ATGAACTGGA AACCTCAATT 
ATTATTAAGG GTAAAAAGCA GGGTTTAATT AGAAACATTG ATAATTACTT TATAAAAAAA 
GCTCTCTTTG GAATGATATT TTATACCGTA TTTTTTGAAG AAGTACTCGA ACTGGATAAT 
AAGAACAAAT ATAACAGTGA AGAACAGGCC CGGGCTATAT TAGATATCAT CTTTAAAGGA 
ATTAAAAACG ATAAGTAA
 
Protein sequence
MSKSEETKKK ILKSAIELVA DKGYASTSTR EIAKNAGVSE ATIFKYYKNK DQLLKKIVSK 
TINDFFKYSL NKSLPEVFEA NKNKSIDYLL QELLTERFQF FKENSKAIQV IFQETMVNKE 
VREFFKNKVW TKMDELETSI IIKGKKQGLI RNIDNYFIKK ALFGMIFYTV FFEEVLELDN 
KNKYNSEEQA RAILDIIFKG IKNDK