| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_05320 |
|---|
| Symbol | |
|---|
| ID | 7313495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 578634 |
|---|
| End bp | 579446 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643610954 |
|---|
| Product | Phytoene dehydrogenase N terminal region |
|---|
| Protein accession | YP_002508284 |
|---|
| Protein GI | 220931376 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.314131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGG TAGGTATTAT TGGGGCAGGA CCGGGTGGTC TGGCTGCTGC TTTATTACTG
GCAAACAGGG GTTTTGAGGT AGAGGTTTTT GAAAAAGAAA ATAAAATTGG GGGAAGAAAC
AGTTATATTA AAGAGGAGGG TTATACTTTT GATATTGGTC CTACCTTTTT TATGATGCCC
TTTATTCTGG AAAGAATATT TCAGGAAACA GGTCGTAACT TAAACGATTA TGTGGATTTG
AAATTACTGG AACCTTACTA TCAACTTGTT TTTAAAGATG GCAAAAGATT TTATCCATCC
AGAAATAGAG ATCGGGTAAA GGATTCTATT GCAAAAATAA GTCCTGATGA TGCATCTGGG
TTTGATTTAT ATATGAAGGA TAACAAAAAA AAGATGGACA GGACCCTGCC TGCCCTCCAG
CGTGGTTATC ATAAATTTTA TCACCTTTTA AGTAAAGAAG TCCTTAACCT TCTACCGGTA
CTGAGGCCCT GGGAAAGCCT CTGGGATAAT TTAAATAAGT ATTTTTCTGA TGACAGGGTC
AAGCTGGGTT TTACTTTTCA ATCTAAGTAT CTTGGTATGT CACCATATAA TTGTCCTTCT
TTGTTTAGTA TTTTACCCTA TACAGAATAT AAATGGGGTG TTTACCATGT TATGGGGGGA
TTACATAAAT TAACTAAAGC TATGGCTGAC GTAACCCGGG AGTTGGGTGG GAAAATTAAA
CTAAATAAAG AAGTAGCTGA GATAGATATT GTTAATAAAA AGCCCATGGT TTGCATTTTA
AAGATGGGGA TTATAAAAAG TTCGACGAGA TAG
|
|---|
| Protein sequence | MAKVGIIGAG PGGLAAALLL ANRGFEVEVF EKENKIGGRN SYIKEEGYTF DIGPTFFMMP
FILERIFQET GRNLNDYVDL KLLEPYYQLV FKDGKRFYPS RNRDRVKDSI AKISPDDASG
FDLYMKDNKK KMDRTLPALQ RGYHKFYHLL SKEVLNLLPV LRPWESLWDN LNKYFSDDRV
KLGFTFQSKY LGMSPYNCPS LFSILPYTEY KWGVYHVMGG LHKLTKAMAD VTRELGGKIK
LNKEVAEIDI VNKKPMVCIL KMGIIKSSTR
|
|---|
| |