| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_05220 |
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| Symbol | |
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| ID | 7313485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 569891 |
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| End bp | 571396 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 643610945 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002508275 |
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| Protein GI | 220931367 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.141837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATG TTATAGAAAA ACATAAATAT TATATTATAA TAGCTGTTTT TTTAATCATC
ATCTTTTTAT CTTATAACAG CTATCAGAAT ACCACAAACA TTATTAAATC CAAATATATA
ACCCATCAAA CCCTGATTGA AAAAAGTATT ATTAATTCCA TAAATAATAC CAACTACGCC
TACCAGATAG CAGAAAAACT ACTTAATGAT AAAATGGAGA AATTATCACG TCAATTAATA
TCTAAATACA GAGATAATCC AGATGTGCTG ACCTGGGATT TAGAAAAAAT CAAACAAACA
CATAAATATG TTAATATTTA TATTATTGAT AATAACTTAA AAATAATTCA TACTACCTAC
AAAAAAGATT TAGGGCTTGA TTTCAATAAA TATCCTTTAT TCAGTAAGGT CTTAAGAAAA
AGACTTGAAG GAGATAATTT CATTGTTGAC CGGATGGATA TATCAATTAA ATCTGGCCAG
CTTAAGAAAT ACAGTTATAT GCCCACTCCA GATCATAAAT ATCTTATCGA ATTAAGCATC
AACCTCAAGG AGATTTTCCC CCAGATAGAT AGTATTAACC TTATTTCACT GACAGAACGT
TTAAAATCAG AGTATCCCAC TATTGAAGAA ATAAATTTTT ATAGAATTAC TCAACAGGGA
AATATAGTTA CAGAATCAAT AACACTCTCT GAATCACTTC TACATACCGA TATTCCTGAC
AAAATTAAGT CACTTGTAAA AAAGTGTGCC AGTACCAGTC AGGTAGTTTC CAGCAAAATA
AAATCAAACT CACAAAATAG ATATTATTCA GTCAGGTTTA TCCCCTGTCT TACCCAGAAT
CCAGAGGATC CCTACTGGTG GGATTCTTCC GTAATCGGAA TTAAATATAA TAATGAGTTT
ATGTTAGAAG AATTAAATCA TTATAAACAT GTATTTATTA TAAACATGAC GATAATAACC
ATTGTATTTG TTTTATTTGT TTTAGTAATA GAATATCTCC TGAAAGAAAC AAAATATATG
GCTTATCATG ATCACCTTAC CAAACTTCCC AACCGGGCTT TATTTGAAAG ATACTTTAAT
AAACTTAAAA ATAATACAAT AAACCTTAAC AAGATGGCAG TCCTTTTCCT TGATCTCGAT
GACTTTAAAA ATGTCAACGA TACCCTGGGA CATGCTATCG GTGATAAACT GCTTATTCAG
GTAGCCAAAC GATTAAAAAA GAACCTTAAA CCATCAGATA CCTTATCAAG ACTGGGTGGG
GATGAATTCA CTTTACTCCT GACCAGTATT AGAACAAGGG AAGATGTGAT TAAATTTGCC
TCAGATTTAA GTGAAGACTT CAAAAAACCA TTTATTCTAG ATGGTAATAA ACTTACAATC
CACCCCAGTA TAGGTATCAG CATCTACCCT GATAATGGTA AAAATCTGGA CTCTCTTTTA
AAGCAGGCCG ATAACGCCAT GTATCAGGCT AAAAAACAAA AATTAGATTT TATCCTCTGG
AGATAA
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| Protein sequence | MNNVIEKHKY YIIIAVFLII IFLSYNSYQN TTNIIKSKYI THQTLIEKSI INSINNTNYA
YQIAEKLLND KMEKLSRQLI SKYRDNPDVL TWDLEKIKQT HKYVNIYIID NNLKIIHTTY
KKDLGLDFNK YPLFSKVLRK RLEGDNFIVD RMDISIKSGQ LKKYSYMPTP DHKYLIELSI
NLKEIFPQID SINLISLTER LKSEYPTIEE INFYRITQQG NIVTESITLS ESLLHTDIPD
KIKSLVKKCA STSQVVSSKI KSNSQNRYYS VRFIPCLTQN PEDPYWWDSS VIGIKYNNEF
MLEELNHYKH VFIINMTIIT IVFVLFVLVI EYLLKETKYM AYHDHLTKLP NRALFERYFN
KLKNNTINLN KMAVLFLDLD DFKNVNDTLG HAIGDKLLIQ VAKRLKKNLK PSDTLSRLGG
DEFTLLLTSI RTREDVIKFA SDLSEDFKKP FILDGNKLTI HPSIGISIYP DNGKNLDSLL
KQADNAMYQA KKQKLDFILW R
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