Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_05140 |
Symbol | |
ID | 7313477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 561302 |
End bp | 562078 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643610937 |
Product | SCP-like extracellular |
Protein accession | YP_002508267 |
Protein GI | 220931359 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | [TIGR02909] uncharacterized protein, YkwD family |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAT TAAAAATCCT TATTCCTTTA ATTCTGGCAG TGTTACTTGT CTCCTGTGCC AATGAGTCCC CTACCCAGGA ATCTTCAATA TTTCAGATTG GTGAAGTTGA ATACTGCAGG GTTACAGATG ACAATGTTAA TGTTAAAGCC GGGGCTGGTA ACACCTTCCC CAATATTGCT ACCCTGAATA AAGGTGATAT AGTAAAGGTT ATGGGGGAAA TGGGGAACTG GTATGTAGTC AGACTCGACA ATAACCAGGT CGGGTGTATT AATACCACAG ATGCCACTCC TGTTGTCAGA GATGGCGGTG AACCGGAAAA ACAACGGCGA ATTGTCGAAC CAGAACCCGC TCCTGAAGCC AAAGACGATG TCGCCCCGGC AAAAAGCCTT ACTTCCATGG AACAACGAAT GGTAAATCTT ATTAACCAGG AACGGCGTAA GAATAACCTT AAGCCCCTGG AAGTCCATAT GAAATTAACA GAGGTAGCCC GGATAAAATC CCAGGACATG GTTGACAATA ATTACTTTAG CCATTATTCG CCAACCTATG GCAGCCCCTT TGATATGATG GACAGATTTG GGATTGAATA CTTACACGCT GCTGAAAACA TTGCTGCCAA TCGCTCCGTA GATGATGCCC ATGAATCACT TATGAGGTCA AGCGGGCACC GCAGAAATAT CCTTAATCCC AACTTCACCC ATGTTGGGGT TGGTATAAAA CCAAGTGATA AGTATGGTTA TATATTTACC CAGATGTTTA TAAGCCGTCC TCAGTAA
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Protein sequence | MRKLKILIPL ILAVLLVSCA NESPTQESSI FQIGEVEYCR VTDDNVNVKA GAGNTFPNIA TLNKGDIVKV MGEMGNWYVV RLDNNQVGCI NTTDATPVVR DGGEPEKQRR IVEPEPAPEA KDDVAPAKSL TSMEQRMVNL INQERRKNNL KPLEVHMKLT EVARIKSQDM VDNNYFSHYS PTYGSPFDMM DRFGIEYLHA AENIAANRSV DDAHESLMRS SGHRRNILNP NFTHVGVGIK PSDKYGYIFT QMFISRPQ
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