| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_05050 |
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| Symbol | |
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| ID | 7314484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 549593 |
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| End bp | 552628 |
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| Gene Length | 3036 bp |
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| Protein Length | 1011 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643610928 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_002508258 |
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| Protein GI | 220931350 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000211109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAC CTGATCTGGC AATAAAAAGA CCGGTTACAA CAACAATGAT AGTTTTACTT
GCAGTCCTGC TGGGTTTTAT CTCCCTGACA AGGGTAAACC TTGATCTTTT TCCCGATATG
TCTTTTCCCA TTGCTGCAGT TATAACAGAA TATGAAGGTG CTGGACCTCA TGAGGTAGAG
AATATGGTTA CTAAACCACT GGAGCAGGCC CTTGCTTCTG TGACCAATAT TAAAACTGTA
TCCTCAACGT CGGGTAAGAA CCAGTCAACA GTTTTAGTGG AGTTTGACTG GGGGACAGAT
ATGGATAAAG CCACTATGAA TATGAGGGAA AAAATAGACC TGATGGAGGA TTATTTACCC
GATGAGGCCA GTAATCCCCT TATTTTCAAG TTTGATCCCT CGTTGATGCC GGTTATGGAA
CTTGGGGTTT CCGGTGAAAT GGATCTGGCT TCTTTAAAGA AATATATTGA TGACAATATC
GCACCCCGTC TGGAGAGATT ACAGGGGGTT GCTTCAGTTG AATTAATCGG GGGAAAAGAA
CGGATTATAC TGGTATCCCT TGACAGGGAT AAGATGAAAA ATTATAATGT CGCTTTTACC
AGTGTTGTTA ATAGTCTTTT AATGGAAAAT ATAAACCTGT CTGGAGGTTC GGTCAGGAGA
GGAAACAGGG AACTCCTTGT CAGGACTACC GGTAAGTTTA AATCCCTTGA TGACATTAAA
AATATTCTTA TTCCTACTTC CAGTGGGAGT GTTCCTTTGA AGGATATAGC CACTGTTAAA
GATACCTTCA AAAAGGTCGA TAGTAAAGCC AGAATGAATA AAGAACCGGG TGTGGTTTTA
TTAATTCAAA AACAGACAGA TGCCAATACG GTAAAGGTGT CCAGCAGAAT AAAAAAGGAA
TTAGCATCCC TGAAGGAAGA AACCAATGGT AGTCTAACCA TAATTCCAAT TATGGATCAG
GCAGATTATA TCGAGAGGTC TATCGGTAAT GTGGGATTAA ATGCTATAAT TGGTGGGATA
CTGGCGGTGT TAATACTATT CTATTTCTTA AGGAATTTTA GCAGTACTTT AATCATTGCC
ACTGCTATTC CGGTTTCAGT AATTACCACC TTTTTGTTGA TTTACTTTGG GGGTTTAACC
CTGAATATGA TGACCCTGGG TGGTCTGGCC CTTGGTATCG GTATGCTTGT AGATAATGCC
ATTGTAGTCC TGGAGAATAT ATTCAGATAT CACCAGGCAG GCCTGGGAAA GGTTAAAGCA
GCCAGCCGGG GGAGTACTGA AGTAGGTATG GCCATTACTG CTTCAACCCT GACGACGATT
ATAGTCTTTT TGCCGATTGT TTATGTAGAG GGGATAGCTT CCCAGTTGTT TAAGGAACTG
GCCCTGACTG TAACCTTTTC CTTACTGGCT TCCCTGGCAG TAGCTTTAAC CCTGATTCCT
ATGTTATCAT CAAAGATTAT AGCATCAGCA AACAACAAAG AAGTATCACG GTTTGAAAAA
TTCCTTGAAA AAACCAGAGA TAAATACCGG GATATGTTAA GGTGGTGCCT GGGGAATAAA
AAGAAAGTAG TTCTGGGATT GGTCATTGTC TTTGTGGCCA GTCTAACCTT AATTCCCCTG
ATCGGGGCCG AATTTATTCC GGAGATGGAT CAGGGACAGT TTACCATTAC GGCAGAATTA
CCTCTGGGGA CCAGCCTGGA CATAACAGAT AAGGTTTCAG CAAGAATTGA AGAAGAAGTA
TTGAAAATTC CTGAAGTCAA GACAATTCTG GCCAGTATAG GAACATCCGG GCAGATGATC
ACAAGCCCCA GTCCAGAAAC TACCTCTATT TATGTCCAGC TAAAGGACCT TTCAAGACGG
GAACGCTCTA CATCAGAGGT TATGGAGGAA TTAAGGGAAA AGCTTGTTTA CCCCGGGGTT
GATATTAAAA TTGAAGCTCT GGATTATATG GCTGCTGGAA TGGGTAATAA ACCAATATCC
ATTATGGTTA AGGGTGATGA CTTAAACCAG CTTGAAAGAC TGGTGAAGCA AATAAAAGAG
CAGATGAAGA CGGTTCCTGG TGTCAGGGAA ATAGAGGATA GTATTACCCG GGGTCGGCCA
GAACTCCATA TTAATGTAGA CCGGGTTCTG GCAGCCCGTT ACGGACTACG GGTAAGTCAA
GTGGCAACTG CTGTAAAGAC TGCAGTTGAT GGAAGAACTG TGACCCGGTA TGAAGTCGGG
GGAGAAGAAT TTGATATCAG GGTTAAATTA AAGGATGATG AACTGACAAC ACCGGAGGAA
TTAGAAGATT TATTAATTAC CTCTTCTGCT GGTTTTAAGG TTCCCCTTAA AGATATAGCC
AGTCTGGATA TTGAAAAGGG ACCTGTTGAA ATATTACGGG ATGATCAGGT CCGGTATGCC
AGTATAACTG CCTCCCTTTT TGGGGTTGAT CTGGGTACAA CAATGGAAAG AATCCAGAAA
AAAATCTCTA ATAATGTCAG GTTGCCTGAC GGTTATGAAA TAGAGTATGG TGGTCAGTTT
AAAGAGATGA TGAGTTCTTT TGATAGCCTT GCATTTGCTT TTATTCTGGC AGTCGTTTTA
GTATATATGG TTCTGGCAGC CCAGTTTGAA TCATTTTTAT ATCCCCTGGT TATAATGTTT
ACCGTACCCA TGTCTATAAT CGGGGTAGTG CTTGGACTAT TTATAACCCG GAATCATATT
TCTGTACCAG CTATAATCGG GGTTATCATG CTGGCTGGAA TTGTTGTCAA TAACGCTATA
GTTCTTGTTG ATTATATCAA TACCCTGAGG AAGAGAGGGC ACTCCCTCAA AGAAGCGATA
CTGGAAGCAG GACCCGTCAG GTTAAGGCCG GTCTTAATGA CAGCTTCAAC TACTATCTTA
GGATTATTAC CACTGGCCCT GGGAATTGGA GAAGGTACTG AAGTTCAGGA ACCCATGGCA
GTAGTGGTTA TTGGGGGTCT TGCTGTATCC ACAATTTTAA CCCTGTTTAT CGTTCCGGTA
CTCTATTCAG TATTTACTGT GGAAAAAGAA GCATAA
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| Protein sequence | MKLPDLAIKR PVTTTMIVLL AVLLGFISLT RVNLDLFPDM SFPIAAVITE YEGAGPHEVE
NMVTKPLEQA LASVTNIKTV SSTSGKNQST VLVEFDWGTD MDKATMNMRE KIDLMEDYLP
DEASNPLIFK FDPSLMPVME LGVSGEMDLA SLKKYIDDNI APRLERLQGV ASVELIGGKE
RIILVSLDRD KMKNYNVAFT SVVNSLLMEN INLSGGSVRR GNRELLVRTT GKFKSLDDIK
NILIPTSSGS VPLKDIATVK DTFKKVDSKA RMNKEPGVVL LIQKQTDANT VKVSSRIKKE
LASLKEETNG SLTIIPIMDQ ADYIERSIGN VGLNAIIGGI LAVLILFYFL RNFSSTLIIA
TAIPVSVITT FLLIYFGGLT LNMMTLGGLA LGIGMLVDNA IVVLENIFRY HQAGLGKVKA
ASRGSTEVGM AITASTLTTI IVFLPIVYVE GIASQLFKEL ALTVTFSLLA SLAVALTLIP
MLSSKIIASA NNKEVSRFEK FLEKTRDKYR DMLRWCLGNK KKVVLGLVIV FVASLTLIPL
IGAEFIPEMD QGQFTITAEL PLGTSLDITD KVSARIEEEV LKIPEVKTIL ASIGTSGQMI
TSPSPETTSI YVQLKDLSRR ERSTSEVMEE LREKLVYPGV DIKIEALDYM AAGMGNKPIS
IMVKGDDLNQ LERLVKQIKE QMKTVPGVRE IEDSITRGRP ELHINVDRVL AARYGLRVSQ
VATAVKTAVD GRTVTRYEVG GEEFDIRVKL KDDELTTPEE LEDLLITSSA GFKVPLKDIA
SLDIEKGPVE ILRDDQVRYA SITASLFGVD LGTTMERIQK KISNNVRLPD GYEIEYGGQF
KEMMSSFDSL AFAFILAVVL VYMVLAAQFE SFLYPLVIMF TVPMSIIGVV LGLFITRNHI
SVPAIIGVIM LAGIVVNNAI VLVDYINTLR KRGHSLKEAI LEAGPVRLRP VLMTASTTIL
GLLPLALGIG EGTEVQEPMA VVVIGGLAVS TILTLFIVPV LYSVFTVEKE A
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