Gene Hore_04980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_04980 
Symbol 
ID7314477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp541234 
End bp542208 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content40% 
IMG OID643610921 
Producthypothetical protein 
Protein accessionYP_002508251 
Protein GI220931343 
COG category[S] Function unknown 
COG ID[COG3272] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.710988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGATA ATCAATTTCC TAAACCAAAT GTAGTTGTCA GTAAATGCCT CGGTTTTGAG 
GCCTGTAATT ATAACGGTCA CCAGTTTAAT AATAAATTTA TATCCATGCT TAAACAATTC
GTTAATTTTA TCCCTGTCTG CCCAGAAACG GCCATTGGCC TACCATCCCC ACGTCAATCA
TTACGCCTCA TCGCCGATGG AGATGAGGTC AGACTGGTTC AACCTGCCGA AGACAGGGAC
CTGACCGGGG ACATGCTGTC TTTCAGCCAT GATTTTTTAA ATTCACTCAA TGATGTTGAG
GGTTTCATTT TAAAAGAAAG GTCTCCTTCC TGTGGTTTGA AAGATATAAA AATTTATCAT
AAAGAGATCA ACAATGTTAC TGGAAAAAAG ACTTCCGGTC TCTTTGCCGG AGCTGTGCTT
GCAACCTTTC CTGATACAGC TATTGAGAGT GAGGGGAGAT TAACCAACCT CAGGATCAGA
GAACATTTTT TAACCAGACT CTTTACCCTT GCCCGTTTCC GCGAGACAAA AAAACAACAA
ACAATGGGGG GGTTAGTAAA CTTCCAAACC ATTAATAAAT TCCTTTTTAT GGCCTATAAC
CAGAAAGAAA TGAGAATTCT GGGAAAGATA GCAGCCAATA ATGAAAAACT ACCGGTATCT
GAGGTCTTTA AAAAATATGA AAAACACCTT AATAAATTAC TATCCCGCCC TCCCAGATAT
AACTCTAATA TCAATGTTCT GATGCACGGG CTGGGGTATT TTTCCGATGA ATTGACAACT
GAAGAAAAAG CCTTTTTCCT GGACACTCTC CAGAAATTCA GAAACAAAAA AGTGCCCCTC
AGTGTCCCCC AGAATATTAT CAGATCCTGG GCTATAAAGT ATAAAGATGA TTATTTACTC
AAACAGACTT ACTTTGCCCC CTTTCCCGAA GAACTAATTG CCCGGACCGA TTCCGGCACT
CCCAAAAACT TTTAA
 
Protein sequence
MLDNQFPKPN VVVSKCLGFE ACNYNGHQFN NKFISMLKQF VNFIPVCPET AIGLPSPRQS 
LRLIADGDEV RLVQPAEDRD LTGDMLSFSH DFLNSLNDVE GFILKERSPS CGLKDIKIYH
KEINNVTGKK TSGLFAGAVL ATFPDTAIES EGRLTNLRIR EHFLTRLFTL ARFRETKKQQ
TMGGLVNFQT INKFLFMAYN QKEMRILGKI AANNEKLPVS EVFKKYEKHL NKLLSRPPRY
NSNINVLMHG LGYFSDELTT EEKAFFLDTL QKFRNKKVPL SVPQNIIRSW AIKYKDDYLL
KQTYFAPFPE ELIARTDSGT PKNF