| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_04920 |
|---|
| Symbol | |
|---|
| ID | 7314471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 534585 |
|---|
| End bp | 535463 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643610915 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002508245 |
|---|
| Protein GI | 220931337 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000000129545 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATGGC AAGAGCTCTT TAAGCGTTTA TTAAAAAATA AATTATCTTT GTTTGGGTTA
ATCATTATAG TATTTTTTGC TCTGATTGCT ATATTTGCTC CATTTATCGC CCCACCGGCT
GATCCTGATG ATCCGTATGC TATTCCCCGG AGTGGCTGGA TTATGGAGCC AACCCCTCCT
GATGAGGATA ATATCTTCGG TACCACTGAA GGTTCCTATG ATATATTCTA TGGTATGATC
TGGGGGACAA GGACCGCTTT TAGGATCGGT TTTATTGTAG TTGGTATCTC AACGATAATT
GGTGTTATTA TCGGGACTAT TTCAGCCTAT TATGGTGGCT GGGTAGACGA GATAGTAATG
AGGATAACCG ATATCTTTAT GTCAATACCA TTTCTGGTGT CAGCCCTGGT ATTGACTGCT
ATCCTGGGTA AAGGACTGGA TAATGTTATG ATAGCTCTGA TTGTCTTTGG CTGGATGGGT
ACAGCCCGTT TGATGCGTTC CCAGGTTTTA GAGATAAAAG CCGAAGAATT TGTTCAGGCT
GCATCTGCTC TGGGGGCTGG CGATTTGAGG ATTATATTCC GCCATGTTCT TTTAAACTGT
ATCTTCCCGG TAGTAATTCA GGCTTCTATG AGAATGGGGT CTATGGTTAT AACAGCTGCT
ACCCTGAGTT TCCTTGGTGT AGGAGCCCCT CCAGGGTATG CTGACTGGGG ACAGATGATA
TCCTTTGCCC GTAACTGGAT TATCGGGGCC CAGGGTAATG CCCTGTCCTA CTGGTATACC
CTTGTTATCC CGGGAACTGC TATTACATTA TTCTGTTTAT CCTGGAATTT AATCGGTGAT
GCTTTCCGCG ATATACTTGA TCCAAAACTG CAAAATTAA
|
|---|
| Protein sequence | MTWQELFKRL LKNKLSLFGL IIIVFFALIA IFAPFIAPPA DPDDPYAIPR SGWIMEPTPP
DEDNIFGTTE GSYDIFYGMI WGTRTAFRIG FIVVGISTII GVIIGTISAY YGGWVDEIVM
RITDIFMSIP FLVSALVLTA ILGKGLDNVM IALIVFGWMG TARLMRSQVL EIKAEEFVQA
ASALGAGDLR IIFRHVLLNC IFPVVIQASM RMGSMVITAA TLSFLGVGAP PGYADWGQMI
SFARNWIIGA QGNALSYWYT LVIPGTAITL FCLSWNLIGD AFRDILDPKL QN
|
|---|
| |