| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_04830 |
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| Symbol | |
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| ID | 7314462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 519345 |
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| End bp | 520751 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643610906 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002508236 |
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| Protein GI | 220931328 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000202645 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACAT ATAAAGAAAA AAGAGACCTT ATTATTAAAG GAAACATAGT TAAAGCCATC
CTGGCCCTGG CAGGCCCGAT CATGTTAAAC AATCTTATCC AGACCATTTA TAATCTAACT
GATACTTACT GGGTTGGACA GCTCGGTGGA ACTGAAGTGG CTGCCATTAC CCTTATCTGG
CCAATAGTAT TTTTTCTCCT GGCCCTGGGT TTCGGAATCA ATATTGCCGG AACTTCCTTG
ATTTCTCAGT ATACCGGAGC TGATGATAAA GAAAATGCCA CCAGGGTAAG TGGACAGATT
GTTTCTTTTT CCCTCTACTT TTCAATCATA ATTGGTATTA TCGGTTTATT TGTGGCTGAA
CCTATTATAA AAATGATGGG TGGTGAAGGC AGGCTCCTGG AGCTGGCCTC AAATTATTTA
AAGATTATAT TTGCCGGAAT GCCGGCCATT TTTCTTTTTT TAGCCTTTAC TTCCATCAAA
CAGGGACAGG GAGATACTGT TACCCCCATG AAATACAGTG CCATATCTGT AGCCCTGAAT
ATGGTCCTTG ACCCCATTTT TATTTTTGGA TTAGACCTGG GAGTAAGGGG AGCTGCCCTG
GCCACAATAT TTTCAAGAAG TGTTTTTGCC ATCTACGCCA TATATACCCT GTTTTACCGG
AAAACAGGTA TTCAACTCCA TTTAAAACAC CTGATTTTAA AACCCAATCT ATTAAAAAAG
ATTATAAAAA TAGGTTTGCC TTCTTCCCTG GGCCAGTCAT CTGCAGCCCT GGGGTTCATC
TTCCTGAATG CCTTTATTAT TTCTTTTGGA AAATCAACCC TGGCTGCCTT CGGTATCGGA
AACCGGATTA ATTCAGTAAT CCTTATGCCT GCCATGGGTA TTGGAAATGC TCTGGCCACC
ATTGTCGGTC AAAACCTGGG GGCTGACCAG ATTAAAAGGG CCAGACAGGC CGTAAAAACA
AGTGCTGTCC TTACCACTGT CTTATTAACA TCGGGAGGGA TTATTCTCTA TCCTTTTGTC
CCCACTATCA TCAGGGCCTT TAATACTGAA CCTGCCATAG TATCCCAGGG GACATTTTAT
CTGAGGTTGA TATCATTATC ACTACCCCTA ATGGGTTTTT TCCAGATCTT TGTAGGTACC
TTTCAGGGAT CTGGCCATAC CCTGATGGCT ATGTTTATAA TGACCGGACG TTTATGGGCT
TTAAGAATAC CCCTGATTAT TTTATTTAAA AAATATACTG ACTGGGGCTC ATCTTCAGTC
TGGTATGCCA TGGTATTAAG TAATGCCATA ATCTCACTGG TAGGTTTTAT AATGTATCTA
ACTGGCAAAT GGCAGAAAAA GGTAATAAAG AAAAAACCCC CTTTGACAGG GAGTGAGGTA
GACCAGAATC TGGATATTGA TAATTAA
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| Protein sequence | MDTYKEKRDL IIKGNIVKAI LALAGPIMLN NLIQTIYNLT DTYWVGQLGG TEVAAITLIW
PIVFFLLALG FGINIAGTSL ISQYTGADDK ENATRVSGQI VSFSLYFSII IGIIGLFVAE
PIIKMMGGEG RLLELASNYL KIIFAGMPAI FLFLAFTSIK QGQGDTVTPM KYSAISVALN
MVLDPIFIFG LDLGVRGAAL ATIFSRSVFA IYAIYTLFYR KTGIQLHLKH LILKPNLLKK
IIKIGLPSSL GQSSAALGFI FLNAFIISFG KSTLAAFGIG NRINSVILMP AMGIGNALAT
IVGQNLGADQ IKRARQAVKT SAVLTTVLLT SGGIILYPFV PTIIRAFNTE PAIVSQGTFY
LRLISLSLPL MGFFQIFVGT FQGSGHTLMA MFIMTGRLWA LRIPLIILFK KYTDWGSSSV
WYAMVLSNAI ISLVGFIMYL TGKWQKKVIK KKPPLTGSEV DQNLDIDN
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