Gene Hore_04730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_04730 
Symbol 
ID7314452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp507081 
End bp508001 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content42% 
IMG OID643610896 
ProductABC transporter related 
Protein accessionYP_002508226 
Protein GI220931318 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000000816769 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAA TTATAGAGAC AAAGAATTTA TCAAAACACT TTGGTACAGA AAAAGCGGTG 
GATAGAATTA ATATTACCGT GAAGAAGGGG GATATCTACG GCTTTCTGGG TAGAAATGGA
GCCGGGAAAA CGACAACCAT CCGTATGCTA CTGGGTCTAA TAAAACCGAC CGGGGGTCAG
ATAAAAATAT TTGGCCAGAA TTTATATACC AATAGAAGCA GGATCTTGAA AAGGATTGGC
TCTACCATTG AATTTTCCGG GTTTTACAGT AATCTTTCAG CCGTCGATAA CCTGAGAATT
AATGCTGCCC TGATAGGGGT CCAAAAGAAA GAGGCCATTG CAGAGGCCCT GGAGATCGTG
GGGTTATATG ATGAGCGCAA CAAAAAAGTC GGTAGTTTTT CCCTGGGTAT GAAGCAGAGG
CTGGGAATTG CCCGGGCTAT TCTCCATGAC CCTGAGTTAT TAATCCTGGA TGAGCCGACC
AATGGACTGG ATCCGGTTGG TATTAAGGAA ATAAGGAAAT TAATTAAGAC CCTTGCTGAA
CAGAAGAATA TTACAATATT TATGTCCAGC CACATCCTGA GTGAAGTCCA GCAGCTGGCT
ACAACTATTG GTATTATCCA TGAAGGTCGC CTCATGGAAG AAATTAATTT CAGTGAATTG
AGGAAACGAA ACCGTAAATA CCTGGAGTTA AAGGTCTCTG ATGATGCAAA AACAGCTATG
CTTATGGAAC GGGAATTTGA TATTACCGAT TATGAAATTT ACCCGGAGAG GGTTGTCAGG
GTTTATTCAT GCCTGGAGCT AGCCGGTAAA ATAAATACCT GTCTTGTTAA AAACGGGATA
GAGGTCAGTA GAATAAGGCT CAGTGAGGAT AACCTTGAGG ATTATTTTGT CAAAATAACA
GGGGGTGAGG TAATTGACTA G
 
Protein sequence
METIIETKNL SKHFGTEKAV DRINITVKKG DIYGFLGRNG AGKTTTIRML LGLIKPTGGQ 
IKIFGQNLYT NRSRILKRIG STIEFSGFYS NLSAVDNLRI NAALIGVQKK EAIAEALEIV
GLYDERNKKV GSFSLGMKQR LGIARAILHD PELLILDEPT NGLDPVGIKE IRKLIKTLAE
QKNITIFMSS HILSEVQQLA TTIGIIHEGR LMEEINFSEL RKRNRKYLEL KVSDDAKTAM
LMEREFDITD YEIYPERVVR VYSCLELAGK INTCLVKNGI EVSRIRLSED NLEDYFVKIT
GGEVID