| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_04690 |
|---|
| Symbol | |
|---|
| ID | 7314448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 501955 |
|---|
| End bp | 503448 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643610892 |
|---|
| Product | citrate lyase, alpha subunit |
|---|
| Protein accession | YP_002508222 |
|---|
| Protein GI | 220931314 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3051] Citrate lyase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01584] citrate lyase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGGGAGA ATACAATTCC TGAAAGGGTA GGTTCATTTA AAAATCTTCG TTCCTATAGT
TATATAAAGC CAGAAAGGAA AAGTAAAATT ATTGGTAGTT TAGAGGAAGC AGTAAATAAG
GTTAACCTCA GGGATGGTAT GACAGTTTCT TTTCACCATC ATTTTCGTGA CGGGGATCTA
ATATTAAATC AGGTTATGGA TATTATTGCA GACAAAGGTG TGAAAAATCT TACCCTGGCT
GCTACTTCTC TGAGAAAAAA CCACGATGAA ATAATTAAAC ACATTAAAAG TGGAGTTATT
AAAAAGATAT ATACTTCTGG TCTAAGGGGG AAATTGGGTG AAGAAATTTG CCGGGGACTT
ATGGATGAAC CTGTTGTTAT TTATTCTCAT GGTGGTAGGG CGGGTGCTAT AGAGAGTGGT
AATTTAAAGA TTGATGTTGC CTTTATTGCT ACTCCTGCAG CAGACAGGTG GGGTAATGCA
AATGGAGTGG AAGGCACCTC TAACTGTGGC TCCCTTGGTT ATACCATGGT TGATGCTAAG
TATGCTGAAA AAGTTGTAGT AATAACTGAT AATTTAATTG AGTTTCCACC AGAACATATT
TCAATATCAC AAGAGAATGT TGACTGCGTG GTTGAGGTTG ATAAAGTAGG AAATAGTGAT
AGAATTGAAA CAGGTTCTCT AAGAAAGGTT TCCAGGCCTA AGGATTTGTA TATTGCCAAA
AACGTTGCCA GGGTAATAAG TAATATCAAG TATTTTCAGA ATGGATTTTC GCTCCAGACA
GGGTCAGGGG GGATCTCCCT GGCAGTTACT GATTTTATAC AGGAGTTAAT GCAGGAAAGA
GACATTAAAG GTAGCTTTAT CCTGGGGGGG ATTACCGGGG CACACACAGA TTTACTAAAG
AAAGGTTTAT TTAAAAAAAT ATTTGATACC CAGACCTTTG ATCTACAGGC AGTAAAATCA
CTTAGAGAAA ACAGAAACCA TATGGAAATA GATGCATCAT TATACGCTAG CGCTTTTAAT
AAAGGTTCAC TGGTTAATAA TCTCGATTTT GTTGTGCTCA GTGCCCTTGA GGTAGATACT
GATTTCAATG TAAATGTGTT AACCGGTTCA GATGGATTTT TCCGCGGGGC ATCAGGGGGA
CATTGTGATA CAGCTTATGG TTCTAAAGTA ACAATTGTGG TTGCCCCATC AGTCAGGGGA
AGAATTCCAA CGATTCGTGA TAAAGTAACT AACATTGTTA CCCCCGGGAA AACAGTAGAC
GTAGTTGTTA CTGAAAGGGG TATATGTGTT AACCCTGAAC GTGAGGATAT ACTTAAAGAT
TTAAAGAATG TAAAGGATAT AGAACTAATT GATATCCATG AATTAAAAGA TAAAGTAGAA
TCTCTGACCG GCAAACCTGA ACCACCTTTA TATGATGAAA AGATTACTGG CTTGATACAG
TACCGGGATG GGACTATAAT AGATGTAGTT AGAAAAATCT CTGACAGATA TTAG
|
|---|
| Protein sequence | MRENTIPERV GSFKNLRSYS YIKPERKSKI IGSLEEAVNK VNLRDGMTVS FHHHFRDGDL
ILNQVMDIIA DKGVKNLTLA ATSLRKNHDE IIKHIKSGVI KKIYTSGLRG KLGEEICRGL
MDEPVVIYSH GGRAGAIESG NLKIDVAFIA TPAADRWGNA NGVEGTSNCG SLGYTMVDAK
YAEKVVVITD NLIEFPPEHI SISQENVDCV VEVDKVGNSD RIETGSLRKV SRPKDLYIAK
NVARVISNIK YFQNGFSLQT GSGGISLAVT DFIQELMQER DIKGSFILGG ITGAHTDLLK
KGLFKKIFDT QTFDLQAVKS LRENRNHMEI DASLYASAFN KGSLVNNLDF VVLSALEVDT
DFNVNVLTGS DGFFRGASGG HCDTAYGSKV TIVVAPSVRG RIPTIRDKVT NIVTPGKTVD
VVVTERGICV NPEREDILKD LKNVKDIELI DIHELKDKVE SLTGKPEPPL YDEKITGLIQ
YRDGTIIDVV RKISDRY
|
|---|
| |