Gene Hore_04660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_04660 
Symbol 
ID7314445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp499731 
End bp500810 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content37% 
IMG OID643610889 
Product(Citrate (pro-3S)-lyase) ligase 
Protein accessionYP_002508219 
Protein GI220931311 
COG category[C] Energy production and conversion 
COG ID[COG3053] Citrate lyase synthetase 
TIGRFAM ID[TIGR00124] [citrate (pro-3S)-lyase] ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAATAT GGAACCTGCG AAAGGAAATT CTTTATCCAC CTGTAGATGA TATGACAGAA 
GTGGCAACAT TTCTTAATGG ACTCAATCTT GAACTGGAAG AAAGGCTTGA TTGTATTCTC 
GTCCTTAGAA TAAATAACAG GGTTGTTGGT ACCGGGGGCC TGGATGGGAA CATTTTGAAA 
TGTGTGGGGG TGGACCCTGA GTTTCAGAAT CAGGGTCTTT TAAATACTAT TGTAAGTGAG 
TTGAAACATA TATTGTACAG AAAAGGGTAT AATAGTCTTT TTGTTTATAC CCCGGAACAC 
CAGGTTGTAA GATATAAGAA TCTCGGGTTT GTTGAAATTG AATCAGTTGG GGATTATCCC 
GTTTTAATGG AAGATAGTAT GGAGGGGTTT AATGGTTTTA TACGTAGTTT AAAGAAAAAA 
ACACAGAGAA TTAATTTAGA TTTAAAAAAA ATAGAAGTGG CATCCCTTGT TATGAACTGT 
AATCCCTTTA CTAAAGGACA CCTCTATTTG ATTGAAAAAG CAGCCAGGGA ACGTGATATT 
GTTTTTATCT TTTTGTTGAC AGAAGATCGT TCCCTTTTTC CTGCTAACAT TAGATATGAA 
CTGGTAAAAA AGGGTACTAA ACACCTTGAT AATGTTATTG TTTTCAGGGG AGGGGATTAT 
ATATTATCTT ATACTACTTT TCCTGATTAT TTTATAGGTT CCCAGAGAGG TGAAGAAAAA 
GCCAGGCGGT ATGCAGAACT TGATGCCAGA ATATTTGCCC GACATATTGC CCCTGCCCTT 
AACATTAACC ACCGTTATGT GGGGAGTGAA CCTTACTCAT CTATAACTGC GATTTACAAT 
CAGGTTTTGA AAAAGGTCCT CCCATTATAT GGTATTAGTT TATGTGAAGT GAAAAGGAAA 
AACTATAAAG GACAGCCTAT AAGTGCTTCA CGTGTAAGGA GGTATCTGGG AGAAGGCAAT 
TATAAAAAAG TAAGGGATCT GGTACCAGAG GTAACCTATA AATTTTTACA GAGTCCTGGA 
GCCCAAAAAA TTGTTGATTA CCTCCAAAAT AAGTTCAGGG GGGATAAAAA TGGAAATTAA
 
Protein sequence
MSIWNLRKEI LYPPVDDMTE VATFLNGLNL ELEERLDCIL VLRINNRVVG TGGLDGNILK 
CVGVDPEFQN QGLLNTIVSE LKHILYRKGY NSLFVYTPEH QVVRYKNLGF VEIESVGDYP 
VLMEDSMEGF NGFIRSLKKK TQRINLDLKK IEVASLVMNC NPFTKGHLYL IEKAARERDI 
VFIFLLTEDR SLFPANIRYE LVKKGTKHLD NVIVFRGGDY ILSYTTFPDY FIGSQRGEEK 
ARRYAELDAR IFARHIAPAL NINHRYVGSE PYSSITAIYN QVLKKVLPLY GISLCEVKRK 
NYKGQPISAS RVRRYLGEGN YKKVRDLVPE VTYKFLQSPG AQKIVDYLQN KFRGDKNGN