Gene Hore_04340 details

Gene Information

• Locus tag: Hore_04340
• ID: 7314413
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothermothrix orenii H 168
• Kingdom: Bacteria
• Replicon accession: NC_011899
• Strand: +
• Start bp: 467674
• End bp: 468381
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 643610857
• Product: ABC transporter related
• Protein accession: YP_002508187
• Protein GI: 220931279
• COG category: [V] Defense mechanisms
• COG ID: [COG1131] ABC-type multidrug transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 51
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAATA TAATAGAGAT AAAAAATTTG AAAAAAATAA TTAATAACAA ATTGATCCTT 
AAAGGTGTTT CGTTAAACAT TCCCCAGGGG AGTATTTTTG GGTTGATTGG GCCAAACGGG 
GCCGGTAAAA CAACCTTAAT TAGACATCTT CTAGGTTTGT ATAAACCTAC AGAAGGTCAA 
ATTTTAATTA TGTCAAACAG TGAAAGACAT ATTAAAAATA AGATTGGGTT CATGCTTCAT 
GCAACGGGGC TTTATCCAGT TCTAACCTGT TATCAGAATC TGGACCTATA TGCTACAATT 
TATAATTTAA ATAATTCCGA AAAGAAGATT AATAATATCT TAAAAACTGT AGGACTTTTA 
AATCGTAAAA ATGACCGGGT TGCTGAGCTT TCAAAGGGAA TGAAGCAAAA ACTTGTTTTA 
GCCAGAGCTT TATTACATGA GCCTGAGATA TTAATACTGG ATGAGCCTAC CGTGGGATTA 
GAAATTGAGA TGAAAGTTTG GTTTAGAAAT TTTATTAAGA CTTTTGTTGA TGATAAATTA 
CGTACAGTAA TAATTTCTTC ACATGAATTA TCAGAATTAG AGAAAATATG TACTCATGTT 
GCTATAATAA GGGATGGGAT GATTGTCAAA CAATATAGAA AAAATGAATT ACCAACAGAT 
GTCTCCCTTG AAGATCTTTA TTTGAAGTCT GGTGGTGAAA TGTCTTGA 

 

Protein sequence

MANIIEIKNL KKIINNKLIL KGVSLNIPQG SIFGLIGPNG AGKTTLIRHL LGLYKPTEGQ 
ILIMSNSERH IKNKIGFMLH ATGLYPVLTC YQNLDLYATI YNLNNSEKKI NNILKTVGLL 
NRKNDRVAEL SKGMKQKLVL ARALLHEPEI LILDEPTVGL EIEMKVWFRN FIKTFVDDKL 
RTVIISSHEL SELEKICTHV AIIRDGMIVK QYRKNELPTD VSLEDLYLKS GGEMS