Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_04250 |
Symbol | |
ID | 7314100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 454473 |
End bp | 455486 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643610848 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_002508178 |
Protein GI | 220931270 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.335349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTACCA TTAAAGATAT AGCAAGAATA GCAGGAGTAT CAACAGCAAC AGTCTCCAGG GTAATAAATA ATTACCCACA AGTGAATGAA AAAACAAAGA AAAAAGTCCT AGAAGTAATG AAGGAGAATA ATTACAGGCC AAATTCAGTT GCCAGGAGTT TATCGACCAG TAGATCATAT ACTATAGGTA TCTTTTTTAC AGATCACTTT GACACTGGTC TACGGCATCC CTTTTTTCGT GAGGTTATTT ACGGTTTAGA GAAAATATTT GGACAAAAGG GATATGATAT ATTATATTTT ACCAAAAGAA ACTGGGATGA TAAATGTAGT TATGTTGACA AGTGCAGGGA TAGACATGTT GATGGTGTAG TCCTGATGGG AGTATCCAGA GAAGATACAA ATCTTCCCCA ACTACTGGAT TCAGGAATCC CTACAGTATT TATCGATGTG GACATTATTG GTAAAAGGGC TTCTTATGTT ACTCTCAATA ATACTGATGG GGCAAAAATG GCTGTTAATT ATCTTTACAG TTTAGGTCAC ACTAAAATAG GTATGATTAT GGGTATCAGT TCAACCAAGA TTGCTCATGA TAGATTTCTC GGGTATCAGA TGGCTTTAAA AGATTTAAGT TTATCATATA ATCCGGACTG GGTATTAAAT GGTTTGTTTT CTGAAGAAGG TGGCTACCGG GCTATGAATA AATTTCTGAA AATGATAGAT AGACCGACGG CAATCTTCTG CCAGAGTGAT ACCATGGCCA TAGGTGCAAT GAAAGCCATT AAAGAAGCAA AGATGAACGT TCCTGGTGAT TTCTCAATCA TAGGTTTTGA TGATATTGAA ATTAGTAAAT ATGTAAAACC GGCTTTGACT ACCATAAGAC AGGATAAAGT AAAGTTGGGC AGGGCTGCAG GGAAACTTCT GTTAAATATT ATTAATAATG ACCTGGATGG TTATAAGCCC GTAATTCTAC CTGTTAAATT GATAAAGCGT AAATCCTGTG CTAAATTGAG ATGA
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Protein sequence | MVTIKDIARI AGVSTATVSR VINNYPQVNE KTKKKVLEVM KENNYRPNSV ARSLSTSRSY TIGIFFTDHF DTGLRHPFFR EVIYGLEKIF GQKGYDILYF TKRNWDDKCS YVDKCRDRHV DGVVLMGVSR EDTNLPQLLD SGIPTVFIDV DIIGKRASYV TLNNTDGAKM AVNYLYSLGH TKIGMIMGIS STKIAHDRFL GYQMALKDLS LSYNPDWVLN GLFSEEGGYR AMNKFLKMID RPTAIFCQSD TMAIGAMKAI KEAKMNVPGD FSIIGFDDIE ISKYVKPALT TIRQDKVKLG RAAGKLLLNI INNDLDGYKP VILPVKLIKR KSCAKLR
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