Gene Hore_04250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_04250 
Symbol 
ID7314100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp454473 
End bp455486 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content36% 
IMG OID643610848 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002508178 
Protein GI220931270 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.335349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTACCA TTAAAGATAT AGCAAGAATA GCAGGAGTAT CAACAGCAAC AGTCTCCAGG 
GTAATAAATA ATTACCCACA AGTGAATGAA AAAACAAAGA AAAAAGTCCT AGAAGTAATG
AAGGAGAATA ATTACAGGCC AAATTCAGTT GCCAGGAGTT TATCGACCAG TAGATCATAT
ACTATAGGTA TCTTTTTTAC AGATCACTTT GACACTGGTC TACGGCATCC CTTTTTTCGT
GAGGTTATTT ACGGTTTAGA GAAAATATTT GGACAAAAGG GATATGATAT ATTATATTTT
ACCAAAAGAA ACTGGGATGA TAAATGTAGT TATGTTGACA AGTGCAGGGA TAGACATGTT
GATGGTGTAG TCCTGATGGG AGTATCCAGA GAAGATACAA ATCTTCCCCA ACTACTGGAT
TCAGGAATCC CTACAGTATT TATCGATGTG GACATTATTG GTAAAAGGGC TTCTTATGTT
ACTCTCAATA ATACTGATGG GGCAAAAATG GCTGTTAATT ATCTTTACAG TTTAGGTCAC
ACTAAAATAG GTATGATTAT GGGTATCAGT TCAACCAAGA TTGCTCATGA TAGATTTCTC
GGGTATCAGA TGGCTTTAAA AGATTTAAGT TTATCATATA ATCCGGACTG GGTATTAAAT
GGTTTGTTTT CTGAAGAAGG TGGCTACCGG GCTATGAATA AATTTCTGAA AATGATAGAT
AGACCGACGG CAATCTTCTG CCAGAGTGAT ACCATGGCCA TAGGTGCAAT GAAAGCCATT
AAAGAAGCAA AGATGAACGT TCCTGGTGAT TTCTCAATCA TAGGTTTTGA TGATATTGAA
ATTAGTAAAT ATGTAAAACC GGCTTTGACT ACCATAAGAC AGGATAAAGT AAAGTTGGGC
AGGGCTGCAG GGAAACTTCT GTTAAATATT ATTAATAATG ACCTGGATGG TTATAAGCCC
GTAATTCTAC CTGTTAAATT GATAAAGCGT AAATCCTGTG CTAAATTGAG ATGA
 
Protein sequence
MVTIKDIARI AGVSTATVSR VINNYPQVNE KTKKKVLEVM KENNYRPNSV ARSLSTSRSY 
TIGIFFTDHF DTGLRHPFFR EVIYGLEKIF GQKGYDILYF TKRNWDDKCS YVDKCRDRHV
DGVVLMGVSR EDTNLPQLLD SGIPTVFIDV DIIGKRASYV TLNNTDGAKM AVNYLYSLGH
TKIGMIMGIS STKIAHDRFL GYQMALKDLS LSYNPDWVLN GLFSEEGGYR AMNKFLKMID
RPTAIFCQSD TMAIGAMKAI KEAKMNVPGD FSIIGFDDIE ISKYVKPALT TIRQDKVKLG
RAAGKLLLNI INNDLDGYKP VILPVKLIKR KSCAKLR