| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_04240 |
|---|
| Symbol | |
|---|
| ID | 7314099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 450354 |
|---|
| End bp | 454226 |
|---|
| Gene Length | 3873 bp |
|---|
| Protein Length | 1290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643610847 |
|---|
| Product | Glucan endo-1,3-beta-D-glucosidase |
|---|
| Protein accession | YP_002508177 |
|---|
| Protein GI | 220931269 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAATAA GACAGAATAA GGTTTGGCTT GTAGCAACAT TAGGATTAAT TATGTTATTA
GTTCTGGCAG GGTGTAAAAG TGGGGTATCT GAAGGAACAT CCAGTTTACT GGTTAATGTC
CAGGATGGTA ATTCCCAGAC AGAGATTAAA GTGTTAGATG ACAGTGGAGA AGTTGCCAGT
AAAACAGGTA AAACAGCTAA GTTTGAATTG TCAAATGGTG TTTATAAGGT TGAAGTCGGT
AATAAAATAT TTGATGTTTA CTTAACAGGT GACACCACTT TAGATGTTAT TTTAGGAGAA
GATGAAAATT TAATTGGTAG TGGATTTTTT AATGAACCCT TATCTAACAA GAAAATAGCT
GGAGACGGAT ATGTAGATAC AGAAGGCAAC TGGGTAGCAT ACTTGAATAC TGGAGGTGGA
GGTAGAGCTA CTGTTAAGAA TGGCAGGGTG ATATACCAGG TTACTAATGC AGGCTCTCAA
CCATATTCAG TACAATTGAT TCAGGCACCA GTTAAGATTG AAAAAGGAGC TAAATATAAA
GTTAGCTTTG ATGCTAAGGC TGCGGATGGC AAAACTATTG CCATTAAGGT TGGTGCTATA
GCTGACCGGG CCTGGGAGGC GTATGCACAA CAAAATATTA AGTTAACAGG AAACTGGGAG
AGCTATGAAT TTGAGTTTAC AATGATGGCA GAAACAAATG AAATGGCCCG CTTTGAGTTC
TGGTTTATAG ATACAGGTAT CTATGAACTT GATAATATTA AATTAGTAAA AGTCGAAGAG
AACGCAATAT CGACAGAAGG AACAAAGACC GAAGCTGATG AGGATTTAGT AGAAGATTGG
GAATTAGTCT GGAGTGACGA ATTTGATGAG ATAAGAGAAG ATGTCTGGAC TTTTGAAGTA
GGGAATGGCC ATAAGCAGGG TATTCCTGGC TGGGGAAATA ATGAGCTACA GTATTATACT
GATGGTGATA ATGCCCATAT TAAAGATGGA AAATTGGTGA TAACCGCTAA AGAAGAAGAA
ATAAGTGATT CTCATGGTAG CTACAACTAT ACTTCAACTA GAATGATAAC CAAAGGTAAA
TTTAGTATGA AATACGGTAG GGTTGAAGTA AGGGCTAAGA TGCCAGAAGG GAAAGGTATT
TGGCCAGCTA TCTGGATGTT AGGGACTGAT ATTGATGAAA ATCCCTGGCC AGCCTGTGGA
GAGATAGATA TTGCAGAGGT TATTGGTAAT ACTCCGAATA TAGTTCATGG TACAATCCAT
GGGCCAATAA GTACTTATAC TGGAATTAGT GCAGGTTATA TACTGCCAGA TGGCAAGAAG
TTCTCTGATG ATTTTCATAT ATTTGCTCTG GAATGGGATG AAGATGAGCT AGAATTTTAT
GTTGATGATG TACTATATCA TGTCGTCAAT AAAGATGAAG TAGGCGGACA GGAGTGGGTT
TATGATAAAC CATTGTTTTT TATCCTGAAT GTAGCTGTTG GAGGTAACTT GCCAGGTTAC
CCAGATGGAA CTACAGAATT CCCACAGACA ATGGAAGTCG ATTATATTAG AGTTTATGAA
GATAAAGACC CTGCTTCTAT AGATGGAGAA GAGAGATGGG ATTCTGAATA TGAACTCAAG
TGGAGAGAAA TGAAGGAGAA AGAAGAATCT TCTAAAGAAA AGAAAAATGC TGATCTTACT
ATAAATCGTG TTGTTAATGG TGCTTTTGAT AGTGAAATTG TTAATGATGT AGAGGCTCAC
CGTGATAACT GGTATGTTCT GATTGAAGAA GGTGGAGAAG TAAATTCTTT TGGTGTAGAG
AATGGAGAGT TTATTATGGA TATAGCTAAT CCCGGTAGTA AAGCGTCAAA TGTACAATTT
GCCCAGTGTT TAAAATTGGA ACCTGGCTCT ATTTATAAGG TGAGTTTTGA TGCCAGGGCA
GAAGATGCCA GGGATATAAA TGTAAAAATG TTGCATCCCA CTAAACATAC GGTTTATGGA
GAAGAAACTA TAGGACTCAA TCCTACTATG GAAAGCTATA GTTTGGAAGT TGAGTTTCCA
GGGAATGTCA GTGAAGTTGT TAACCTATCG TTCGAGTTGG GCGCTCTCAG TGATCAGAGT
AAGGCTACCC GTGTGTACTT AGATAATGTA AAAATTGAAA AAATAAGGGG AGTCAATTAC
ACAGAATATG GTAATTGCCT GCTGGATAAC GGGGAACTAT TATTTGGAAA TCCAGATTAC
CATGCTATTT CATATAGTGG TTACCGAAAG AATGTTAGAA GAGAGAGTAC AGTTCCCACT
GTTGAGCAGA TAAAAGACGA TATGAAAATT CTGGAGGCAA TGGGTGTCAA ATTATTAAGG
ACCTATAATA CTAATGAGTT CTCCCAGAGT GAAAAAATCC TGAAGGCTAT CAGTGAACTA
AAGGAAGAAG ACCCTGATTT TGAAATGTAT GTTATGTTAG GTGCCTGGAT ATCATGTGAA
GGTGCTTATA CAGACAGTGT TAATCATAAT GTAGAAGATG AAGATAAAAA TAAAGGCGAA
ATAGATAAAG CTATTGAACT TGCAGCTAAA TATCCCCAGA TTGTCAAGGC AATTGCGGTA
GGAAATGAAG CTATGGTAAG GTGGCAAGCC CATTATGTTC CAGCAGAAGT TATCTTGAAA
TGGGTAAATT ACTTAAGAGA AGCTAGAGAA AATGGAGATA TTCCCGGGGA GACCTTAATA
ACAAGTTCCG ATAACTTTGC AGCCTGGGGA GGAGAGGGTA GTTATCGCAG TAAAACTTTA
AAAGATTTAG TTAAAGCTGT TGACTTTGTT TCCCTTCATA CCTATCCTTT CCATGATACA
CATTATGTTT CAAAGTTCTG GAAGACTCCA GAAGAAAATA AAGACCTTTC AGATAAAGAG
AAGATTGATA ATGCAATGAA AAGAGCTTTT GAACGGGCTA AAAATCAATA CCAATTGGTA
AAAGAGTATG TTCGCAGTAT TGATCCTGAG AAACCAATAC ACATTGGTGA GACTGGCTGG
GCAAGTGTGT CCACTGACTT GTATGGTTCA GGTGGTTCCA GGGCAGCTGA TGAATATAAA
CAGAAACAAT ATTATGATCA GATAAGAGAA TGGAGCGATG CCTGTAATAT TAGTGTCTTC
TTTTTTGAGG GATTTGATGA GCCATGGAAG GGTTCAAACA ACCCGGGACA CTCTGAGAAA
CACTTTGGAT TATTTACTGT TGATGGTAAA GCAAAATATG TGTTGTGGGA CCTGGTAGAT
AAAGGTATCT TTGATGGTCT GACCAGGGAT GGTAATCCTG TAAAGAAAAC CTATAATGGT
GATGAAAGTG CCTTAATGGA AGATGTGCTA ACACCGCCAC TGGCTCAGAA CCATACTGCA
GGAGCTGCAG TAACAGAAGA CACTTATGTT GTATTAGATA CAAAGAAAAA TACTGAAACA
AATAGCTATC TTGCTATTCC GGCAATTGTA AATCCATGGG AAGGAACCTG TGGAATGGGT
TTAACTGATG ATGGAATAGT TGAGATAACT ACAGGAACTG GAAACTGGTG GGGATGTGGC
CTGGAGATAA GAGAAGGCGT AAATCTAAGT AATTTTGCCA ATGGTCATCT CCATTTTGAT
ATCAAAGGTG ACACCAGTTC ATCCTTTAAC ATTGGTTTCC AGACAGGAGT ATATGGGAGT
AGTGAACGTC CCCAGACTAA TAACTACGTA ACCTTTGGTC CTGGTAGATC ATATCAGTTA
ACAAGAAACT GGAAATCCTA TTCAATACCT GTTAGTGAGT TAATGAAAGG TGCAGATTTA
ACTGATGTAA CCTCGTTACT ATATCTAATG GGAGATGCTA ACTTTGATGG CCGTAAAATC
TATGTCAAAA ATGTTTATTA TACTCAAGAT TAG
|
|---|
| Protein sequence | MKIRQNKVWL VATLGLIMLL VLAGCKSGVS EGTSSLLVNV QDGNSQTEIK VLDDSGEVAS
KTGKTAKFEL SNGVYKVEVG NKIFDVYLTG DTTLDVILGE DENLIGSGFF NEPLSNKKIA
GDGYVDTEGN WVAYLNTGGG GRATVKNGRV IYQVTNAGSQ PYSVQLIQAP VKIEKGAKYK
VSFDAKAADG KTIAIKVGAI ADRAWEAYAQ QNIKLTGNWE SYEFEFTMMA ETNEMARFEF
WFIDTGIYEL DNIKLVKVEE NAISTEGTKT EADEDLVEDW ELVWSDEFDE IREDVWTFEV
GNGHKQGIPG WGNNELQYYT DGDNAHIKDG KLVITAKEEE ISDSHGSYNY TSTRMITKGK
FSMKYGRVEV RAKMPEGKGI WPAIWMLGTD IDENPWPACG EIDIAEVIGN TPNIVHGTIH
GPISTYTGIS AGYILPDGKK FSDDFHIFAL EWDEDELEFY VDDVLYHVVN KDEVGGQEWV
YDKPLFFILN VAVGGNLPGY PDGTTEFPQT MEVDYIRVYE DKDPASIDGE ERWDSEYELK
WREMKEKEES SKEKKNADLT INRVVNGAFD SEIVNDVEAH RDNWYVLIEE GGEVNSFGVE
NGEFIMDIAN PGSKASNVQF AQCLKLEPGS IYKVSFDARA EDARDINVKM LHPTKHTVYG
EETIGLNPTM ESYSLEVEFP GNVSEVVNLS FELGALSDQS KATRVYLDNV KIEKIRGVNY
TEYGNCLLDN GELLFGNPDY HAISYSGYRK NVRRESTVPT VEQIKDDMKI LEAMGVKLLR
TYNTNEFSQS EKILKAISEL KEEDPDFEMY VMLGAWISCE GAYTDSVNHN VEDEDKNKGE
IDKAIELAAK YPQIVKAIAV GNEAMVRWQA HYVPAEVILK WVNYLREARE NGDIPGETLI
TSSDNFAAWG GEGSYRSKTL KDLVKAVDFV SLHTYPFHDT HYVSKFWKTP EENKDLSDKE
KIDNAMKRAF ERAKNQYQLV KEYVRSIDPE KPIHIGETGW ASVSTDLYGS GGSRAADEYK
QKQYYDQIRE WSDACNISVF FFEGFDEPWK GSNNPGHSEK HFGLFTVDGK AKYVLWDLVD
KGIFDGLTRD GNPVKKTYNG DESALMEDVL TPPLAQNHTA GAAVTEDTYV VLDTKKNTET
NSYLAIPAIV NPWEGTCGMG LTDDGIVEIT TGTGNWWGCG LEIREGVNLS NFANGHLHFD
IKGDTSSSFN IGFQTGVYGS SERPQTNNYV TFGPGRSYQL TRNWKSYSIP VSELMKGADL
TDVTSLLYLM GDANFDGRKI YVKNVYYTQD
|
|---|
| |