Gene Hore_04210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_04210 
Symbol 
ID7314096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp445222 
End bp446067 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content40% 
IMG OID643610844 
Productglycoside hydrolase family 16 
Protein accessionYP_002508174 
Protein GI220931266 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2273] Beta-glucanase/Beta-glucan synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTCTGT TTTGTTTAGT TTTATTGCTG GTTGTAGTAT TGTCTGGATG TAGTGACTTG 
TTTGGTACTG TACCTGAGGA TATGAACAAA GATATAAACG AAGATACGAA CGGCTGGACA
CTTGTCTGGT CAGAAGAATT TGACCAGGAC GAAATTGACC TCAGTACCTG GAATTTTGAA
ATAGGTAATG GACATGCAGA GGGTATACCC GGGTGGGGTA ATAATGAGCT GGAATACTAT
ACTGCTGGTG ACAATGCTGA AATAATTGAT GGCAAGCTAG TTATTACAGC CAGGAAAGAG
AATCGAAGGG ATGAGTATGG TACCTATAAT TACACCTCAT CCAGGATGAC TACTGAAGGT
AAATATGAAG TTGAATATGG AAAAATTGAG GTCCGGGCTA AACTCCCTGA AGGGCAGGGT
ATCTGGCCTG CTATCTGGAT GCTTGGTAAT GATATTGGTG AGGTTGGATG GCCTGCCTGT
GGGGAAATTG ATATTATGGA ACTTTTAGGC CATCAACCAT CTATTGTTTA TGGTACAGTA
CATATGCCCG GTACTTCTAA AGGTAGTAGT TATAGCCTTT CTTCAGGCAA GTTTTCTGAT
GCCTTCCATG TCTTTGCCAT CGAATGGGAC AAAGATAAAA TAGAATGGTA TGTAGATGGA
CAATTATACC ATGTATTTAA TAAGAATGAG ATTCCGGACA GTTCATGGGT ATTTGACCAT
CCATTTTTCC TGATCCTCAA TATTGCAGTT GGTGGAAACT GGCCTGGGTA TCCTGATGAA
ACTACTATTT TCCCCCAGAC TATGGAAGTG GATTATATAA GGGTTTATGA AAATATTAAA
CCTTAA
 
Protein sequence
MFLFCLVLLL VVVLSGCSDL FGTVPEDMNK DINEDTNGWT LVWSEEFDQD EIDLSTWNFE 
IGNGHAEGIP GWGNNELEYY TAGDNAEIID GKLVITARKE NRRDEYGTYN YTSSRMTTEG
KYEVEYGKIE VRAKLPEGQG IWPAIWMLGN DIGEVGWPAC GEIDIMELLG HQPSIVYGTV
HMPGTSKGSS YSLSSGKFSD AFHVFAIEWD KDKIEWYVDG QLYHVFNKNE IPDSSWVFDH
PFFLILNIAV GGNWPGYPDE TTIFPQTMEV DYIRVYENIK P