Gene Hore_04200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_04200 
Symbol 
ID7314095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp443671 
End bp444696 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content38% 
IMG OID643610843 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002508173 
Protein GI220931265 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACCA TTAAGGATAT AGCAAAGATA GCAGGAGTGT CAACAGCTAC GGTCTCCAGG 
GTAATAAATA ATTACCCTGA TGTCAGTGAA AAAACCAAGA AAAAAATCCT GAAAATCATG
AAAGAAAATA ATTACAGGCC TAATTCTGTT GCCAGAAGCC TGTCTACCAG CAAGTCTAAT
ATTATAGGTA TATTTTTTAC TGACCATTTT AATACCGGAA TACACCATCC CTTTTTCCGG
GAGGTTATTT ATGGTCTGGA GAAAATATTT GATGAAAAAG GATATGATAT ATTATATTTT
ACTAATAGAA AATGGGGAGA AAATTTCAGC TATGTAGAGA AGTGCCATGA CAGGCAGGTA
GATGGGGTGG TATTGATGGG GGTTCCAAAG ACCGATTCCA ATATCCCCAA ACTTCTCGAT
TCCGATATAC CAACTGTTTT TGTTGATCTT GATATAGTTG GTAAAAAAGC CTCATATGTT
ATTTCAGATA ATTATAGAGG GGCAGAAATG GCTGTTAATT ATCTACACAG TCTAGGCCAT
ACCAGAATCG GGATGATTAT GGGAATAAGT TCGACCAAGG TTACCAATGA TAGGTTGCTT
GGCTATCAGA CAGCCATTAA AAATTTAGGT CTTGTCTATA ACTCACAGTG GATACTCGAT
GGTAGATACA CTGAAGAAGG TGGTTATCAG GCCATGTCTA AATATCTGGA GATGGATGAG
AGGCCAACAG CTATTTTCTG TCAGAGTGAT TCCATGGCAA TTGGGGCTAT GCAGGCCATA
CATGAAGCCG GTATGAGTGT CCCTGAAGAT TTTTCCTTAA TTGGTTTTGA TGATATTGAA
GTGAGCCGCT ATGTAAACCC TGCTTTAACT ACGATAAAAC AGGATAAAAT AGGTCTGGGA
AGGGCAGCCG GTGAACTGTT GATAAATATT GTAGAAAATG AGAATGAAAG TCAAGCTCCT
GTTATTCTTC CAGTTGAACT GGTTAAGAGA GATTCCTGTG GTCGACCTAA TTTAGACATG
GTTTAA
 
Protein sequence
MATIKDIAKI AGVSTATVSR VINNYPDVSE KTKKKILKIM KENNYRPNSV ARSLSTSKSN 
IIGIFFTDHF NTGIHHPFFR EVIYGLEKIF DEKGYDILYF TNRKWGENFS YVEKCHDRQV
DGVVLMGVPK TDSNIPKLLD SDIPTVFVDL DIVGKKASYV ISDNYRGAEM AVNYLHSLGH
TRIGMIMGIS STKVTNDRLL GYQTAIKNLG LVYNSQWILD GRYTEEGGYQ AMSKYLEMDE
RPTAIFCQSD SMAIGAMQAI HEAGMSVPED FSLIGFDDIE VSRYVNPALT TIKQDKIGLG
RAAGELLINI VENENESQAP VILPVELVKR DSCGRPNLDM V