| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_04140 |
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| Symbol | |
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| ID | 7314089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 427852 |
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| End bp | 430962 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643610837 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_002508167 |
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| Protein GI | 220931259 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAG TATTGAAAGC CAGTGCAGGA ACAGGGAAGA CCTATCGACT TTCTTTAGAA
TATGTTAATT CATTGCTCCG GGGGCAGTCC TTTGATGAAA TTGTAGTTAT GACCTTTACC
CGGAAGGCAA CCGCTGAAAT CAGAGAGAGA ATTTTTGAGC ATATTGAAGA CCTTCTGGAA
CATGGTATGG AAAGTAAAGT CTATAATAGT CTCAAGGAAA TATATCATGA TATATCTTTT
AACAGGGATA ACCTGCAGAA AAAATATAAG GCTATGCTAA TTAATAAGGA TAAACTCCAT
ATCTATACAA TTGATAGTTT TATTAACAGG GTATTCAAAC AGGCTATTGC CCCCTATCTG
GGTGTTTATA AATACGAAAT AGTGGAGGAC GATAAAAATA CCGAAATAGT GGAAAAGGTT
TTTAAGGAAA TACTGGATAA TCCAGATGAT TTTGCCCTGA TGGAGAAATT CTTGAGTGAT
AACCCGGAGC GAAAGATTAA AGAGTATATA AATTTAATAA AAAGTATGTT AAATAACCGC
TGGAAGTTTT TATTGATTGA CCATAAACCA CGTAAAAAAA GGGAAACCGG ACAGCTGACT
CCGCTCCTGG ATGAATGCCT GAATATCCTT GAAAGTGCGG CCCGGGATAA GGGAAAGGAT
TTTTCAAAAG ATTATTTTAA AAAATCATTC CAGGGACAGA TGAGTCAATA CCTGGAACTT
GAAACCCATG AGGCCAGAAA GGAGTTTATT ATAAAAAATA AAGATTCCTT TTTCAAAGAA
TCATTCTGGA ATGGTAATAA TCTCAGGGGG AAGGCCATGG CCCCATTTAA GGAACACCTT
GAAGTAAAGT ACAGGGAGTT TTTGGAAAAA ATGGCCGGGT ATATATATAA TGAAGAGATG
ATTCCCTACG AAGAAGAGGT GTTTAAATTT TACTCCCGGA TTTTTGAGAT CTATGACCGG
ATTAAATTTA AGGAAAAGAC CTTTACCCAC ACCGATATCA GTAATTATAC CTATAAATAT
TTAAGGGAAG AGGCCCTGGA TCTTCTTGAT GGGAAAAAGG TAAGTGATTA TTTTTACGAA
CTTCTGGGGA GTGAGGTTAC TACCCTATTT ATTGATGAAT TTCAGGATAC CAGTATTCTG
CAGTGGAAGA TTCTAAAACC CCTTATCGAC AGGTGCAGAA ATGTGATCGC TGTTGGTGAT
GAAAAACAGT CTATCTACGG CTGGCGTGGT GGAGAAAAGG AACTTTTCTC CAGGCTTGAT
AAGATTCTGG ATGGGGAAAG TGAATCCCTG AAGGTGTGTT ACAGGAGTGA AAAAGAAATA
ATTAAATTTA TTAATCGCTT TTTTACAGGT CTGGAGATTG ACTGGGAATA TAATGAAGTT
AAACATCTGC CTGAAAAACA GGAAGGTTTT ATAGAAATAT TGCTGGGTGG TGACAGCTTA
AAAAATAGAA CTAACAGTAA AAAATTTAAC AATATGAGTG AAGAAAAACA GAGGCAGATA
ATTGAACTTA ACGAAAAGGT TACAGTAAAT TTAAAGAGAA AGATTGTGGA GCGAATTAAG
AATATTTCTG ATTTAAGCGG GGTAGGTATC CTGGCCCGGT CTAACGACGA CCTGTCAGAT
ATTGCCACTG AACTGGATAA AAAAGGGATT CCCTATATCC TTGAGAGTAA GGATAGTCTG
ATTAACCATG AGGCCGTAAA ACCCCTTTAT TTCCTACTTG GTTATCTGAC ATATAATGAT
TATCTGGAGT TAATAAAGTT TTTAAGGAGT GACCTTGTCG GTCTTGATAA CCAGGGGTTG
AAATATCTAT TGAGAAACAG GGACAGGGTT GAGAAGTTTA TGCGGGGAAG GGGAGTAAAG
TTGAGTAATG CTCTTCTGCA GAAGGCTCTG TCTGAAATAA GGCGGTTAAA GGCCCTGAAT
TACAGGGAAT TAACAAATAC CCTGATACAG AAGTCAGGGT TAATGGATCT CTTTGGCGAT
AACAGTGGTG CCCTCAAAAA CATTTACCAC TTCTTTAAAT TAATGCGTCA GTTCTCCTGC
CTCAAGGATT TTATGGATTA TATTGAAGAA AACAAAAACT CAGATGAATT AAAACAGGTA
GGTGTTAAGG AGGAGAACGC TGTAAAATTA ATGACCATTC ACAAGTCTAA AGGCCTTTCC
TTTGAAACCG AGTTTTTCTA CTGGTGTCCT GGTAAAAGGA AAGGTGGCCG GAGCAATCGT
ATGGAAATAT ACGTGAGATT TGATGATAAT TTTGAGGAAC TGGAAGATTA TTTACTGACC
CATTCCAGAT ACACCAGATA TTTTGAGTAT CTGGGATTTA ATTTTAATAA AGAGCAGGAA
GAAAAAGAGC TAATAGAGGA AATAAATAAT GTTTATGTAG CCCTGACCCG GCCTGAGAAG
AACCTTTATT TATACATTGA AGGGCCGAGA ATTTTTGAGG TAGATAAACC CGGACAAGAG
TGGAAAGGCA AAAAATACAG TTTTTATGAA AAGGCCATCC TTAAAGGGGC AGGGGTTAAT
TCCCTGTGTG ACCTTATTGA GGGCAGGAGG CTCGGTCATT TTAATAGTGA AGAGAAAGAT
AGAGGTGAGG AAAATATCCT TCTCCCTGAC CTGGAACCAT ATTTTCAGCC TGGTGATCTA
CCGGAAGAAC TCCTCGACAG TTTTAATGAT AATAAAGATC TTAATATGAA CTTAAAAATG
GAGATTGACC GGATAGAGGG GCTGGCAATC CATTATTATC TGGAGCATAT CCAGTATAAT
AGCCAGGAAG AACGGGATTA TGCCAGGAAG ATGGTTCTGG CCCGGTATGG TAATATCCTG
GGACCAGTCA AGACTGATGA GATTTTTGAA AGGGTCGAAA GTTTTATCAA AAACAACCCC
GGTTATTTTG AGGATAGATG GAAGGTATTT ACTGAATATG AAATTAAAGA TGGTAACCAG
GTTTACAGGA TAGACCGACT GCTGGTAGAT GAGGGGGGAA AAGAGATAAA GATTATAGAT
TATAAGAGCG GGGAAACCAG GGAAAAAACA CAGCTTGAAA AATATAAAGA TCTCCTGGAA
GAAAAAACCG GGGGAGAGTA TTCCATATCT GTTGAGTTTG TGGAGGTGTA A
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| Protein sequence | MIKVLKASAG TGKTYRLSLE YVNSLLRGQS FDEIVVMTFT RKATAEIRER IFEHIEDLLE
HGMESKVYNS LKEIYHDISF NRDNLQKKYK AMLINKDKLH IYTIDSFINR VFKQAIAPYL
GVYKYEIVED DKNTEIVEKV FKEILDNPDD FALMEKFLSD NPERKIKEYI NLIKSMLNNR
WKFLLIDHKP RKKRETGQLT PLLDECLNIL ESAARDKGKD FSKDYFKKSF QGQMSQYLEL
ETHEARKEFI IKNKDSFFKE SFWNGNNLRG KAMAPFKEHL EVKYREFLEK MAGYIYNEEM
IPYEEEVFKF YSRIFEIYDR IKFKEKTFTH TDISNYTYKY LREEALDLLD GKKVSDYFYE
LLGSEVTTLF IDEFQDTSIL QWKILKPLID RCRNVIAVGD EKQSIYGWRG GEKELFSRLD
KILDGESESL KVCYRSEKEI IKFINRFFTG LEIDWEYNEV KHLPEKQEGF IEILLGGDSL
KNRTNSKKFN NMSEEKQRQI IELNEKVTVN LKRKIVERIK NISDLSGVGI LARSNDDLSD
IATELDKKGI PYILESKDSL INHEAVKPLY FLLGYLTYND YLELIKFLRS DLVGLDNQGL
KYLLRNRDRV EKFMRGRGVK LSNALLQKAL SEIRRLKALN YRELTNTLIQ KSGLMDLFGD
NSGALKNIYH FFKLMRQFSC LKDFMDYIEE NKNSDELKQV GVKEENAVKL MTIHKSKGLS
FETEFFYWCP GKRKGGRSNR MEIYVRFDDN FEELEDYLLT HSRYTRYFEY LGFNFNKEQE
EKELIEEINN VYVALTRPEK NLYLYIEGPR IFEVDKPGQE WKGKKYSFYE KAILKGAGVN
SLCDLIEGRR LGHFNSEEKD RGEENILLPD LEPYFQPGDL PEELLDSFND NKDLNMNLKM
EIDRIEGLAI HYYLEHIQYN SQEERDYARK MVLARYGNIL GPVKTDEIFE RVESFIKNNP
GYFEDRWKVF TEYEIKDGNQ VYRIDRLLVD EGGKEIKIID YKSGETREKT QLEKYKDLLE
EKTGGEYSIS VEFVEV
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