| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_04020 |
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| Symbol | |
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| ID | 7314077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 412184 |
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| End bp | 413491 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643610826 |
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| Product | Exodeoxyribonuclease I subunit D |
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| Protein accession | YP_002508156 |
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| Protein GI | 220931248 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0356343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTGTA TACAAAATCA ATATAAGTTT ATTGTACATG AACTTATAAC TGTTGTTATA
AAAAGGGGGA GAGGTCCTTT GAGAATTTTA CATACTGCTG ACTGGCATCT GGGGAAACAC
CTGGAGGGAT GGAGTAGATA TGAAGAACAA AAAGAATTTG TTGAAGAAAT AATTGAAATA
GCTGATGATA ATAAGGTAGA CATGGTTTTA ATATGTGGGG ATATATTTGA CACTACTAAC
CCTCCAGCGG AGGCGGAACA GCTTTTTTTT CAGGCGATGG ATTACCTGTC AAAAGGTGGG
GAGAGGGTAA TCTGTTTGAT CTCTGGTAAC CATGATAGTC CCAACCGTCT TATGGCCCCG
GGGCCTCTGG CTTCCAGACA GGGAATTTTT ATTATGGATG AGCCCCGGGG AGACAGGTAT
AAGCTGGATG ATGACCGGGT GTTAAACCGT GGTCAGGGGT ACATAGAACT TGAAATTAAC
GGAGAAGGTG TTGTCCTTAC GGCTCTGCCC TATCCTTCTG AGAGCCGGTT AAACCAGGTC
TTTTCATGGA CCGGTGATGA CCGGGCAGTG CAGGAAAGTT ATTCCCGTCG AGTGGGTCAG
ATTTTTTCCC ATTTAGAGCA ATATTATCGT GAAAATACAA TCAACATTGC CATGAGTCAC
CTTTTCGTTG CCGGGGGTCA GACTACCCGG TCTGAAAGAC CCATCCAGGT TGGTGGCAGC
CTGACAGTAT TACCGGAACA CCTTCCAGAA AAATCCCAGT ACACAGCCCT GGGCCACCTC
CATCGTTATC AAATTGCTTC TTCAGCCCGG AGGGCTTACT ATTCAGGTTC TCCGTTGCAG
TATAGCCTCA GTGAAAAAGA TCATAAAAAG TGTGTTAACC TTGTAGAGCT TCATCCGGGA
GAGGAGGCCC GGATTGAACA GGTTGAATTG ACAACAAAAA AACCAATCGA GGTCTGGGAA
GCAGAAGGGG TTGAAGAGGC TATAAAAATG GTTGAGGCCA ATAAGGACCG TTCTGTCTGG
GCATACCTTT ATATAAATGT GGATAAAACT CTACTTCAGT CTGAAATTAA AAAAATAAAG
GAAATTAAAA AGGATATTCT ATGTATTAAC CCCATAACCC CTGAAGAGAA ATATGAATGG
GAAACTATAA AGATGCCTGA TGAGGACCTG GATATAATGG AATTGTTTAA AGAATATTAT
CGTAAGACAA AAAAAGTTGA GCCTGATGAC GATATTATCA GGATGTTTAG CAGTATTGTT
AATGATACCA GGGAAAAGGG GGAGCATGAT GAGACCGCTG CTTCTTAA
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| Protein sequence | MDCIQNQYKF IVHELITVVI KRGRGPLRIL HTADWHLGKH LEGWSRYEEQ KEFVEEIIEI
ADDNKVDMVL ICGDIFDTTN PPAEAEQLFF QAMDYLSKGG ERVICLISGN HDSPNRLMAP
GPLASRQGIF IMDEPRGDRY KLDDDRVLNR GQGYIELEIN GEGVVLTALP YPSESRLNQV
FSWTGDDRAV QESYSRRVGQ IFSHLEQYYR ENTINIAMSH LFVAGGQTTR SERPIQVGGS
LTVLPEHLPE KSQYTALGHL HRYQIASSAR RAYYSGSPLQ YSLSEKDHKK CVNLVELHPG
EEARIEQVEL TTKKPIEVWE AEGVEEAIKM VEANKDRSVW AYLYINVDKT LLQSEIKKIK
EIKKDILCIN PITPEEKYEW ETIKMPDEDL DIMELFKEYY RKTKKVEPDD DIIRMFSSIV
NDTREKGEHD ETAAS
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